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The map label for this gene is 45657983

Identifier: 45657983

GI number: 45657983

Start: 2579934

End: 2581277

Strand: Reverse

Name: 45657983

Synonym: LIC12135

Alternate gene names: NA

Gene position: 2581277-2579934 (Counterclockwise)

Preceding gene: 45657984

Following gene: 45657982

Centisome position: 60.35

GC content: 33.78

Gene sequence:

>1344_bases
ATGTTACAAAAACTTTATATTCTATATCCAAATTTGAAAGATATACTGCATAACAGCGGTTGGCTTTTTTTTGATAAAAT
TTTTAGAATGGGAATGGGAATGTTTTTAGGAGTTTGGATAGCCCGCTATCTAGGTCCTGACAGCTATGGAAAGTTAAATT
ACGTGATCGCCTATATTGCGTTAATTGGTAGTTTTACAAATTTAGGCTTAGACGGGGTTGTTGTCAGAGAACTCATTAAA
GAGAAAGCTCAAAAACAAGAAATTATCTCTACTTCTTTTTTGTTACAATTGATCGCGGGAGTATTCGCATACGGAGGAGC
AATTTTACTCATTCCAATTCTTAGACCAGATGAATCGGATCTATTTTGGATGGTATTTCTCGTCGGGTTGACTCTTATTT
TTCGCTCAGTTGGAGTAATAAAATATTGGTATGAGGCCCAAGTTTTATCCAAATACTTTGTATGGCTTGAAAACGGATTA
TTTTTTGTGTTTTCGGGAGTGCGTATACTATTGATTTTAAATGGTTTCGGTGTGTTTGCTTTTATATGGGTCGGATTGAT
AGAATCATTTATTAGTTTATTTGGTTATTCTTTATTATATAAATATCATAATGGCTCTTTGTCTGTACTTCACGCAAATT
GGAAAAGGGCTCAAACATTATTGAGAGATAGTTGGATGTTGTTACTTTCAGGATTGGCCGTAATTGTGTATATGCGGATC
GATCAGATTATGATAGGTCAGATGATGGGAGACGAAGCGGTTGGAGTATATACGGCGGCTGTCAAAATCAGCGAAGTATG
GTATTTTATTCCAATGACGATTGCGTCATCGATATTTCCCGCAATATTAAAAGCGAAAGAGTTTAGTCAAAAGTTATATC
TAGAAAGATTGAGTCTTTTACATTCTTTTATGTTTTTGTTAGCTCTAATGATAGCTATACCGATGACATTTTTGTCTGAT
CCGATTATTCAGATGTTTTTCGGAGAAAAATTTTCAGAAGCGGGAGTTATATTAGCTATTCATATTTGGGCTGGAATTTT
TGTTTTTTTAGGAGTGGCTAGTAGTCGCTATTATCTAACTGAAAATTTACCTAAGGGAGAGTTATATAAAAGTATATCTG
GTTGTTTGGCAAACATAGTTTTAAATTATTTTTTGATCCCTCTCTATGGTATTAAGGGAGCTGCCATTGCTACAGTAATT
TCTCAATTTATAGCGAGCACTTTATTCAATCTATTTTTCAAACGAACTCGTGAAATATTTTTTATACAATTGGAATCGGT
TTTTTTTTGGAGAATGTTCAGTCGTTTAAATCAACTTAGAAATCGATTGCTTAAGGATGGTTAA

Upstream 100 bases:

>100_bases
TACTGCGTTTTATTAAAAATTTCTAAAGAATGATCGCGTAAAATTCTTTAAGGTTTTAAGAAAAGTTCTTAAGTTAAAAA
AAATAAAATCAAAACTTGTA

Downstream 100 bases:

>100_bases
AAGATGTCATTAGCTCCGATTGCACTTTTTGTTTATAATAGACCGGAACATACAAAAAGAACGATCGATTCTTTATCAAA
CAACGATTATGCGGAACAGT

Product: polysaccharide biosynthesis export protein

Products: NA

Alternate protein names: Polysaccharide Biosynthesis Family Protein; Lipopolysaccharide O-Side Chain Biosynthesis Protein; Flippase Wzx; Capsular Polysaccharide Biosynthesis Protein; MatE Family; Oligosaccharide Transporter; O-Antigen Transporter Related Protein; LPS Biosynthesis Related Polysaccharide Transporter; Heteropolysaccharide Repeat-Containing Protein; Polysaccharide Transporter PST Family; O-Antigen Flippase; LPS Biosynthesis Related Flippase; Polysaccharide Biosynthesis Export Protein; O-Antigen And Teichoic Acid Export Protein; Oligosaccharide Translocase; Methyltransferase FkbM Family; Lipopolysaccharide Biosynthesis Protein; Polysaccharide Biosynthesis Related Protein; Lipopolysaccharide/O-Antigen Transporter; PST Family Transporter

Number of amino acids: Translated: 447; Mature: 447

Protein sequence:

>447_residues
MLQKLYILYPNLKDILHNSGWLFFDKIFRMGMGMFLGVWIARYLGPDSYGKLNYVIAYIALIGSFTNLGLDGVVVRELIK
EKAQKQEIISTSFLLQLIAGVFAYGGAILLIPILRPDESDLFWMVFLVGLTLIFRSVGVIKYWYEAQVLSKYFVWLENGL
FFVFSGVRILLILNGFGVFAFIWVGLIESFISLFGYSLLYKYHNGSLSVLHANWKRAQTLLRDSWMLLLSGLAVIVYMRI
DQIMIGQMMGDEAVGVYTAAVKISEVWYFIPMTIASSIFPAILKAKEFSQKLYLERLSLLHSFMFLLALMIAIPMTFLSD
PIIQMFFGEKFSEAGVILAIHIWAGIFVFLGVASSRYYLTENLPKGELYKSISGCLANIVLNYFLIPLYGIKGAAIATVI
SQFIASTLFNLFFKRTREIFFIQLESVFFWRMFSRLNQLRNRLLKDG

Sequences:

>Translated_447_residues
MLQKLYILYPNLKDILHNSGWLFFDKIFRMGMGMFLGVWIARYLGPDSYGKLNYVIAYIALIGSFTNLGLDGVVVRELIK
EKAQKQEIISTSFLLQLIAGVFAYGGAILLIPILRPDESDLFWMVFLVGLTLIFRSVGVIKYWYEAQVLSKYFVWLENGL
FFVFSGVRILLILNGFGVFAFIWVGLIESFISLFGYSLLYKYHNGSLSVLHANWKRAQTLLRDSWMLLLSGLAVIVYMRI
DQIMIGQMMGDEAVGVYTAAVKISEVWYFIPMTIASSIFPAILKAKEFSQKLYLERLSLLHSFMFLLALMIAIPMTFLSD
PIIQMFFGEKFSEAGVILAIHIWAGIFVFLGVASSRYYLTENLPKGELYKSISGCLANIVLNYFLIPLYGIKGAAIATVI
SQFIASTLFNLFFKRTREIFFIQLESVFFWRMFSRLNQLRNRLLKDG
>Mature_447_residues
MLQKLYILYPNLKDILHNSGWLFFDKIFRMGMGMFLGVWIARYLGPDSYGKLNYVIAYIALIGSFTNLGLDGVVVRELIK
EKAQKQEIISTSFLLQLIAGVFAYGGAILLIPILRPDESDLFWMVFLVGLTLIFRSVGVIKYWYEAQVLSKYFVWLENGL
FFVFSGVRILLILNGFGVFAFIWVGLIESFISLFGYSLLYKYHNGSLSVLHANWKRAQTLLRDSWMLLLSGLAVIVYMRI
DQIMIGQMMGDEAVGVYTAAVKISEVWYFIPMTIASSIFPAILKAKEFSQKLYLERLSLLHSFMFLLALMIAIPMTFLSD
PIIQMFFGEKFSEAGVILAIHIWAGIFVFLGVASSRYYLTENLPKGELYKSISGCLANIVLNYFLIPLYGIKGAAIATVI
SQFIASTLFNLFFKRTREIFFIQLESVFFWRMFSRLNQLRNRLLKDG

Specific function: Unknown

COG id: COG2244

COG function: function code R; Membrane protein involved in the export of O-antigen and teichoic acid

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51149; Mature: 51149

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLQKLYILYPNLKDILHNSGWLFFDKIFRMGMGMFLGVWIARYLGPDSYGKLNYVIAYIA
CCCEEEEECCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
LIGSFTNLGLDGVVVRELIKEKAQKQEIISTSFLLQLIAGVFAYGGAILLIPILRPDESD
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCC
LFWMVFLVGLTLIFRSVGVIKYWYEAQVLSKYFVWLENGLFFVFSGVRILLILNGFGVFA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
FIWVGLIESFISLFGYSLLYKYHNGSLSVLHANWKRAQTLLRDSWMLLLSGLAVIVYMRI
HHHHHHHHHHHHHHHHHHHHHEECCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHH
DQIMIGQMMGDEAVGVYTAAVKISEVWYFIPMTIASSIFPAILKAKEFSQKLYLERLSLL
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HSFMFLLALMIAIPMTFLSDPIIQMFFGEKFSEAGVILAIHIWAGIFVFLGVASSRYYLT
HHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHCCCCEEEE
ENLPKGELYKSISGCLANIVLNYFLIPLYGIKGAAIATVISQFIASTLFNLFFKRTREIF
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHE
FIQLESVFFWRMFSRLNQLRNRLLKDG
EEEHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MLQKLYILYPNLKDILHNSGWLFFDKIFRMGMGMFLGVWIARYLGPDSYGKLNYVIAYIA
CCCEEEEECCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
LIGSFTNLGLDGVVVRELIKEKAQKQEIISTSFLLQLIAGVFAYGGAILLIPILRPDESD
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCC
LFWMVFLVGLTLIFRSVGVIKYWYEAQVLSKYFVWLENGLFFVFSGVRILLILNGFGVFA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
FIWVGLIESFISLFGYSLLYKYHNGSLSVLHANWKRAQTLLRDSWMLLLSGLAVIVYMRI
HHHHHHHHHHHHHHHHHHHHHEECCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHH
DQIMIGQMMGDEAVGVYTAAVKISEVWYFIPMTIASSIFPAILKAKEFSQKLYLERLSLL
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HSFMFLLALMIAIPMTFLSDPIIQMFFGEKFSEAGVILAIHIWAGIFVFLGVASSRYYLT
HHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHCCCCEEEE
ENLPKGELYKSISGCLANIVLNYFLIPLYGIKGAAIATVISQFIASTLFNLFFKRTREIF
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHE
FIQLESVFFWRMFSRLNQLRNRLLKDG
EEEHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA