| Definition | Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_005823 |
| Length | 4,277,185 |
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The map label for this gene is rfbC [H]
Identifier: 45657975
GI number: 45657975
Start: 2569315
End: 2571063
Strand: Reverse
Name: rfbC [H]
Synonym: LIC12127
Alternate gene names: 45657975
Gene position: 2571063-2569315 (Counterclockwise)
Preceding gene: 45657976
Following gene: 45657974
Centisome position: 60.11
GC content: 31.39
Gene sequence:
>1749_bases ATGAAAACCTTAATTTTAAAAATCGATGAATTTTATCGAAAGCTAAAATACCTTTTTAGGCAGTATCAATATTATTTTAG AATATACAAAGATTCTAAGATTCCATCTGAGTTTGTATACTCTCCTTTGGTGAGTATTTTAGTCCCAGTGTATAATACTC GACTCGATCATTTAAAAGAAATGGTAGACTCAGTAACTTCACAAAGTTATACAAATTGGGAATTAATACTTATAGACGAT GCTTCTCCAGACGAAAATCCAGGAAATTATCTGAAAGAAAGAAGCAAAACAGATTCTAGAATTTTATATTTTCGTTTGAA TAAAAACGGAGGAATCAGTTTAACAACTCAAAAAGCTTTTGAATATTCTAAAGGAGAATACATAGCGTTTTTAGATCATG ATGATCGTTTGTCAAAGAATGCTTTATCAATTGTCGTGAAAACGTTACAGGAAGAAAAAAATAGACCTGAATTTCTTTAT TCAGACGAAGTCTTTCAATCTAAAATTCCAGGAATTTTTTCACTTTCTGTAAAGCCTGAATTCTCACCTGAAAAATTAAT CTCTCATAATTATATCTGCCACTTTGTAGTAGTTTCAAAAAACTTAATTTATCGAATGGGTGGAATTCGAGAAGGATATG ACGGAAGTCAGGATCATGAATTCGCTCTTAGAGCATCTAGATTTACTAATCAAATTAAAAGGCTGCCGTATTTTTTATAT ATATGGCGTCTTCATGGAGGAAGTTTTTCTAGAAAAAAAGCAGAGATTTGCGAAGCCAGCTCCAAAAAAGCTATTTTAGA ACATTATAATGATAAAAAGGAAGAAGTTGAAAAAATTGTTTCTGGAAATTACCCTTTTACCTATCACGTTTTCCGTAAAT TAAAGAAAAAATATATAGTATCAGTGATAGCGCGAAACTGTAGCGACTTAAATTGGGTGTTTTTTCGAGAAAGTATACAA AATTTTCTTTCTTTTCCCTTAGATGTTAAAATCGAACTTTGGCTTCCAGAACAAAGTGTACTGAAACAAATTCAGGAAGA GAAAAATATAAAATTAGAATATTATAAATTATTTAATAATTCTTTAGTTTCTCGAGAGTTAAATCAAATTGTTGCAGCCA CAAAAGGAGATTTTGTTTTTTTTTGGAATCCTGGGTTTCAGCCTAATAATCAAAGCTGGCTCTACGAACTATTACAACAT GCGCAGTTCTCTGAGATTGGAGCAGTTTCACCTATCGTTCTCAATAAAAAAAAGGAACTCGTTTATTCTTCGTTAATTCT TGGTAAATATGGGTTTATTGGAAGGTCTAGAAATAATCTTACTGTGTCCAAAACTAAGATATGGTCCGGAGAATGGGTTG AAAAAAATGTTTCCGCTATATCTGGAAACTGTTTGTTGATTTCGAAAAAAAGTTGGAATGTGATAAACGGATTGGACGAG TCTTTTCAGAAATACTATTGGGATATAGATTTATGTCTGAGACTTCGAAGGGCGGGTTTTAGGCTGGTGAGTAATCCGTT TTCAGAATTCATTCAGACGATCTCTGATTATAAAATTTTTAAAGAATTAAATCCAAAATTTTTGGAAAGTGTAAATGATC GTAAAAAACTCATAACAAAATGGGGAGTTTTTTTGGATGTAGATGATTTTTACTCTTCACATTCTGATTTAGTTGGAAAA GATATGATTCCGAAAGGTTTAAATCATGGTTTCCTAGAATGGTATTGGAAAAAAAAATGGTCCATCTAA
Upstream 100 bases:
>100_bases GCAAACTGGGTGTTTTATTATGTAGTTTTGAATAGTTCGGAATATTAAGTATATTTTATATGGTATCAGTAAAAATTAAA ACGTAATGATATAATTAAAA
Downstream 100 bases:
>100_bases TAAAAAATATTCCAATATTAGAAATTAATAAAGTAGTCTTAGTTTTAAGGAAAAATTTTTTAGAATTTTAGTTTATATAA AGTTTAAAAAATAAATTTAG
Product: glycosyl transferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 582; Mature: 582
Protein sequence:
>582_residues MKTLILKIDEFYRKLKYLFRQYQYYFRIYKDSKIPSEFVYSPLVSILVPVYNTRLDHLKEMVDSVTSQSYTNWELILIDD ASPDENPGNYLKERSKTDSRILYFRLNKNGGISLTTQKAFEYSKGEYIAFLDHDDRLSKNALSIVVKTLQEEKNRPEFLY SDEVFQSKIPGIFSLSVKPEFSPEKLISHNYICHFVVVSKNLIYRMGGIREGYDGSQDHEFALRASRFTNQIKRLPYFLY IWRLHGGSFSRKKAEICEASSKKAILEHYNDKKEEVEKIVSGNYPFTYHVFRKLKKKYIVSVIARNCSDLNWVFFRESIQ NFLSFPLDVKIELWLPEQSVLKQIQEEKNIKLEYYKLFNNSLVSRELNQIVAATKGDFVFFWNPGFQPNNQSWLYELLQH AQFSEIGAVSPIVLNKKKELVYSSLILGKYGFIGRSRNNLTVSKTKIWSGEWVEKNVSAISGNCLLISKKSWNVINGLDE SFQKYYWDIDLCLRLRRAGFRLVSNPFSEFIQTISDYKIFKELNPKFLESVNDRKKLITKWGVFLDVDDFYSSHSDLVGK DMIPKGLNHGFLEWYWKKKWSI
Sequences:
>Translated_582_residues MKTLILKIDEFYRKLKYLFRQYQYYFRIYKDSKIPSEFVYSPLVSILVPVYNTRLDHLKEMVDSVTSQSYTNWELILIDD ASPDENPGNYLKERSKTDSRILYFRLNKNGGISLTTQKAFEYSKGEYIAFLDHDDRLSKNALSIVVKTLQEEKNRPEFLY SDEVFQSKIPGIFSLSVKPEFSPEKLISHNYICHFVVVSKNLIYRMGGIREGYDGSQDHEFALRASRFTNQIKRLPYFLY IWRLHGGSFSRKKAEICEASSKKAILEHYNDKKEEVEKIVSGNYPFTYHVFRKLKKKYIVSVIARNCSDLNWVFFRESIQ NFLSFPLDVKIELWLPEQSVLKQIQEEKNIKLEYYKLFNNSLVSRELNQIVAATKGDFVFFWNPGFQPNNQSWLYELLQH AQFSEIGAVSPIVLNKKKELVYSSLILGKYGFIGRSRNNLTVSKTKIWSGEWVEKNVSAISGNCLLISKKSWNVINGLDE SFQKYYWDIDLCLRLRRAGFRLVSNPFSEFIQTISDYKIFKELNPKFLESVNDRKKLITKWGVFLDVDDFYSSHSDLVGK DMIPKGLNHGFLEWYWKKKWSI >Mature_582_residues MKTLILKIDEFYRKLKYLFRQYQYYFRIYKDSKIPSEFVYSPLVSILVPVYNTRLDHLKEMVDSVTSQSYTNWELILIDD ASPDENPGNYLKERSKTDSRILYFRLNKNGGISLTTQKAFEYSKGEYIAFLDHDDRLSKNALSIVVKTLQEEKNRPEFLY SDEVFQSKIPGIFSLSVKPEFSPEKLISHNYICHFVVVSKNLIYRMGGIREGYDGSQDHEFALRASRFTNQIKRLPYFLY IWRLHGGSFSRKKAEICEASSKKAILEHYNDKKEEVEKIVSGNYPFTYHVFRKLKKKYIVSVIARNCSDLNWVFFRESIQ NFLSFPLDVKIELWLPEQSVLKQIQEEKNIKLEYYKLFNNSLVSRELNQIVAATKGDFVFFWNPGFQPNNQSWLYELLQH AQFSEIGAVSPIVLNKKKELVYSSLILGKYGFIGRSRNNLTVSKTKIWSGEWVEKNVSAISGNCLLISKKSWNVINGLDE SFQKYYWDIDLCLRLRRAGFRLVSNPFSEFIQTISDYKIFKELNPKFLESVNDRKKLITKWGVFLDVDDFYSSHSDLVGK DMIPKGLNHGFLEWYWKKKWSI
Specific function: Involved in O-antigen biosynthesis [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788372, Length=156, Percent_Identity=29.4871794871795, Blast_Score=67, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001296 - InterPro: IPR001173 [H]
Pfam domain/function: PF00534 Glycos_transf_1; PF00535 Glycos_transf_2 [H]
EC number: NA
Molecular weight: Translated: 68571; Mature: 68571
Theoretical pI: Translated: 9.65; Mature: 9.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTLILKIDEFYRKLKYLFRQYQYYFRIYKDSKIPSEFVYSPLVSILVPVYNTRLDHLKE CCEEEEEHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHH MVDSVTSQSYTNWELILIDDASPDENPGNYLKERSKTDSRILYFRLNKNGGISLTTQKAF HHHHHHCCCCCCEEEEEEECCCCCCCCHHHHHHCCCCCCEEEEEEECCCCCEEEEEHHHH EYSKGEYIAFLDHDDRLSKNALSIVVKTLQEEKNRPEFLYSDEVFQSKIPGIFSLSVKPE HCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHCCCEEEEEECCC FSPEKLISHNYICHFVVVSKNLIYRMGGIREGYDGSQDHEFALRASRFTNQIKRLPYFLY CCHHHHHCCCCEEEEEEEHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCEEEE IWRLHGGSFSRKKAEICEASSKKAILEHYNDKKEEVEKIVSGNYPFTYHVFRKLKKKYIV EEEECCCCCCHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHH SVIARNCSDLNWVFFRESIQNFLSFPLDVKIELWLPEQSVLKQIQEEKNIKLEYYKLFNN HHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHCCCEEEEEEHHHH SLVSRELNQIVAATKGDFVFFWNPGFQPNNQSWLYELLQHAQFSEIGAVSPIVLNKKKEL HHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHCCHHHCCCCCCCEECCHHHH VYSSLILGKYGFIGRSRNNLTVSKTKIWSGEWVEKNVSAISGNCLLISKKSWNVINGLDE HHHHHHHHCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHCCCCEEEEECCCCCHHHHHHH SFQKYYWDIDLCLRLRRAGFRLVSNPFSEFIQTISDYKIFKELNPKFLESVNDRKKLITK HHHHHHCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHH WGVFLDVDDFYSSHSDLVGKDMIPKGLNHGFLEWYWKKKWSI HCCEEEEHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCC >Mature Secondary Structure MKTLILKIDEFYRKLKYLFRQYQYYFRIYKDSKIPSEFVYSPLVSILVPVYNTRLDHLKE CCEEEEEHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHH MVDSVTSQSYTNWELILIDDASPDENPGNYLKERSKTDSRILYFRLNKNGGISLTTQKAF HHHHHHCCCCCCEEEEEEECCCCCCCCHHHHHHCCCCCCEEEEEEECCCCCEEEEEHHHH EYSKGEYIAFLDHDDRLSKNALSIVVKTLQEEKNRPEFLYSDEVFQSKIPGIFSLSVKPE HCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHCCCEEEEEECCC FSPEKLISHNYICHFVVVSKNLIYRMGGIREGYDGSQDHEFALRASRFTNQIKRLPYFLY CCHHHHHCCCCEEEEEEEHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCEEEE IWRLHGGSFSRKKAEICEASSKKAILEHYNDKKEEVEKIVSGNYPFTYHVFRKLKKKYIV EEEECCCCCCHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHH SVIARNCSDLNWVFFRESIQNFLSFPLDVKIELWLPEQSVLKQIQEEKNIKLEYYKLFNN HHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHCCCEEEEEEHHHH SLVSRELNQIVAATKGDFVFFWNPGFQPNNQSWLYELLQHAQFSEIGAVSPIVLNKKKEL HHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHCCHHHCCCCCCCEECCHHHH VYSSLILGKYGFIGRSRNNLTVSKTKIWSGEWVEKNVSAISGNCLLISKKSWNVINGLDE HHHHHHHHCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHCCCCEEEEECCCCCHHHHHHH SFQKYYWDIDLCLRLRRAGFRLVSNPFSEFIQTISDYKIFKELNPKFLESVNDRKKLITK HHHHHHCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHH WGVFLDVDDFYSSHSDLVGKDMIPKGLNHGFLEWYWKKKWSI HCCEEEEHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8626291 [H]