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The map label for this gene is 45657937

Identifier: 45657937

GI number: 45657937

Start: 2527873

End: 2528295

Strand: Reverse

Name: 45657937

Synonym: LIC12089

Alternate gene names: NA

Gene position: 2528295-2527873 (Counterclockwise)

Preceding gene: 45657940

Following gene: 45657933

Centisome position: 59.11

GC content: 35.46

Gene sequence:

>423_bases
ATGAATCGACCGATCATTAGACTTTGGGGAATGGAAAACATCGGGTTGATTATTGAATACCAAACCGGGATCATCTATTC
AAATCAAACTGGAGGATATGCTTGTTTACAACCTGAAGTGGAAGGGGTTCTGGTTCCGCTTGAAGATTTAGAAAATAAAA
TTCAGCAAAGTTTACAGAAATACTTTACGGGACCAAAGTGGAGAAGTTGGTGTAATGATGGTATTGATGAGGAAACAGCG
GATTTTATAGATTCACTTTTGAAACCGTTTTATTATTTAAAAGTCAATCGAAGTAAGTTACTTCAATCACACGAAGCTTG
GATTTATATGGAACTTTTATTGCAAAAGGGAGATTTGGAATATCAAATCTATTCTGGTTTTTTGGAAAAGTCCGGAATTC
TTACTTGGGGAAATAGCGATTAA

Upstream 100 bases:

>100_bases
TGGTGGAAATGATTTCAAAAATAAAAGAGGAATCTATTAGAAGATTTGCAAGTTTTGCAATTCAAGATTGTTCGATGATT
AAAATAGATAGGGTACAATT

Downstream 100 bases:

>100_bases
AAATAAAAAAACTCTTATCTACTATTAGTAAAATAGAATTATCCGTTCATTCCTATGAAAAAGAAACGGAAGAAAAATTA
ACTCCAATAAAAATTTTTTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 140; Mature: 140

Protein sequence:

>140_residues
MNRPIIRLWGMENIGLIIEYQTGIIYSNQTGGYACLQPEVEGVLVPLEDLENKIQQSLQKYFTGPKWRSWCNDGIDEETA
DFIDSLLKPFYYLKVNRSKLLQSHEAWIYMELLLQKGDLEYQIYSGFLEKSGILTWGNSD

Sequences:

>Translated_140_residues
MNRPIIRLWGMENIGLIIEYQTGIIYSNQTGGYACLQPEVEGVLVPLEDLENKIQQSLQKYFTGPKWRSWCNDGIDEETA
DFIDSLLKPFYYLKVNRSKLLQSHEAWIYMELLLQKGDLEYQIYSGFLEKSGILTWGNSD
>Mature_140_residues
MNRPIIRLWGMENIGLIIEYQTGIIYSNQTGGYACLQPEVEGVLVPLEDLENKIQQSLQKYFTGPKWRSWCNDGIDEETA
DFIDSLLKPFYYLKVNRSKLLQSHEAWIYMELLLQKGDLEYQIYSGFLEKSGILTWGNSD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16278; Mature: 16278

Theoretical pI: Translated: 4.38; Mature: 4.38

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRPIIRLWGMENIGLIIEYQTGIIYSNQTGGYACLQPEVEGVLVPLEDLENKIQQSLQK
CCCCEEEEECCCCCCEEEEEECCEEEECCCCCEEEECCCCCEEEECHHHHHHHHHHHHHH
YFTGPKWRSWCNDGIDEETADFIDSLLKPFYYLKVNRSKLLQSHEAWIYMELLLQKGDLE
HHCCCCHHHHHCCCCCHHHHHHHHHHHCCCEEEEECHHHHHHHCCHHHHEEHHHHCCCCC
YQIYSGFLEKSGILTWGNSD
CHHHHHHHHCCCEEEECCCC
>Mature Secondary Structure
MNRPIIRLWGMENIGLIIEYQTGIIYSNQTGGYACLQPEVEGVLVPLEDLENKIQQSLQK
CCCCEEEEECCCCCCEEEEEECCEEEECCCCCEEEECCCCCEEEECHHHHHHHHHHHHHH
YFTGPKWRSWCNDGIDEETADFIDSLLKPFYYLKVNRSKLLQSHEAWIYMELLLQKGDLE
HHCCCCHHHHHCCCCCHHHHHHHHHHHCCCEEEEECHHHHHHHCCHHHHEEHHHHCCCCC
YQIYSGFLEKSGILTWGNSD
CHHHHHHHHCCCEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA