Click here to switch to the map view.

The map label for this gene is yedW [C]

Identifier: 45657936

GI number: 45657936

Start: 2526970

End: 2527392

Strand: Direct

Name: yedW [C]

Synonym: LIC12088

Alternate gene names: 45657936

Gene position: 2526970-2527392 (Clockwise)

Preceding gene: 45657935

Following gene: 45657938

Centisome position: 59.08

GC content: 30.97

Gene sequence:

>423_bases
ATGAAAAACAAAAAGTTAAAATGTATTCTTCTCATTGACGATAACCAAGATGATAATTTTTTCCATGAAAGAGTTATCTA
TAAAGGAAGTTATGCGGAAAAAGTAGTCACAAAACAGTCCGGTCAGGAAGCTCTGTTTTTTTTAAAAAATAAATTCAATA
ATATAGAACCATTTCCAGACCTCATCTTTCTGGATATTAATATGCCTGGTATGAACGGTTGGGAATTTTTAGAAGAATAT
AAAAAATTAGATCAAGAATTTCAAACTAGCACGATCATCATCATGTTAACTACTTCGGACAATCCGGATGATAAAAATAA
ATTCAGCCACTTTGGTTCCACTTCGGATTTTAAAACCAAACCTCTTACCAATGCGATGTTAGATGAAATTTTAGAAAGAT
ATTTTTCTGAGTCGGTTTCTTAA

Upstream 100 bases:

>100_bases
AAAAAAATTATAGAATTACACAATGGTCGTATTTGGGTCGAATCCGACTCGGAAGTAGGAAGTAATTTTCACTTTATCAT
TCCTAATTTAAATTAAACTT

Downstream 100 bases:

>100_bases
ACGTTTTGATTTGAAAGAATCTTTAAGTTTTATTAAAATTCTAAAATTTCAAAACTGGTTTTGTAGAAAAAAACTTTCGT
GTTTCTCAATTCAATCAAAA

Product: response regulator

Products: NA

Alternate protein names: Response Regulator Receiver; Two-Component Response Regulator; Response Regulator; Two-Component System Signal Receiver; Receiver Component Of A Two-Component Response Regulator; Response Regulator Of Ato Ornithine Decarboxylase Antizyme; Two-Component Response Regulator CheY-Like; Receiver Protein Of A Two-Component Response Regulator; Two Component Response Regulator

Number of amino acids: Translated: 140; Mature: 140

Protein sequence:

>140_residues
MKNKKLKCILLIDDNQDDNFFHERVIYKGSYAEKVVTKQSGQEALFFLKNKFNNIEPFPDLIFLDINMPGMNGWEFLEEY
KKLDQEFQTSTIIIMLTTSDNPDDKNKFSHFGSTSDFKTKPLTNAMLDEILERYFSESVS

Sequences:

>Translated_140_residues
MKNKKLKCILLIDDNQDDNFFHERVIYKGSYAEKVVTKQSGQEALFFLKNKFNNIEPFPDLIFLDINMPGMNGWEFLEEY
KKLDQEFQTSTIIIMLTTSDNPDDKNKFSHFGSTSDFKTKPLTNAMLDEILERYFSESVS
>Mature_140_residues
MKNKKLKCILLIDDNQDDNFFHERVIYKGSYAEKVVTKQSGQEALFFLKNKFNNIEPFPDLIFLDINMPGMNGWEFLEEY
KKLDQEFQTSTIIIMLTTSDNPDDKNKFSHFGSTSDFKTKPLTNAMLDEILERYFSESVS

Specific function: Probable Member Of A Two-Component Regulatory System Yedw/Yedv. [C]

COG id: COG0784

COG function: function code T; FOG: CheY-like receiver

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16399; Mature: 16399

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNKKLKCILLIDDNQDDNFFHERVIYKGSYAEKVVTKQSGQEALFFLKNKFNNIEPFPD
CCCCCEEEEEEEECCCCCCHHHHHHEECCCHHHHHHHHCCCCHHHHHHHHHCCCCCCCCC
LIFLDINMPGMNGWEFLEEYKKLDQEFQTSTIIIMLTTSDNPDDKNKFSHFGSTSDFKTK
EEEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHCCCCCCCCCC
PLTNAMLDEILERYFSESVS
CHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKNKKLKCILLIDDNQDDNFFHERVIYKGSYAEKVVTKQSGQEALFFLKNKFNNIEPFPD
CCCCCEEEEEEEECCCCCCHHHHHHEECCCHHHHHHHHCCCCHHHHHHHHHCCCCCCCCC
LIFLDINMPGMNGWEFLEEYKKLDQEFQTSTIIIMLTTSDNPDDKNKFSHFGSTSDFKTK
EEEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHCCCCCCCCCC
PLTNAMLDEILERYFSESVS
CHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA