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The map label for this gene is panD

Identifier: 45657922

GI number: 45657922

Start: 2511945

End: 2512295

Strand: Direct

Name: panD

Synonym: LIC12074

Alternate gene names: 45657922

Gene position: 2511945-2512295 (Clockwise)

Preceding gene: 45657921

Following gene: 45657923

Centisome position: 58.73

GC content: 42.17

Gene sequence:

>351_bases
ATGCAGATAACCGTAATGAAAGGTAAAATCCACCGGGCCACGGTAACAGACGCGGATTTAAACTATGAAGGAAGTCTGAC
CGTGGATATGGATCTTGTAGATGCTGCGGGAATGCGAGTATACGAGAAGGTTTCCGTAGTGAATGTAAACAATGGAGCCC
GTTTTGAAACCTATATCATAGAGGGAAAAAGAGGTTCCGGAGAAATCTGTTTGAATGGGGCAGCCGCAAGACTAGGAATG
AAGGGTGATAAGATCATCATCATCACTTATGCTCAAGTAGAAGAAAAAGAACTTGCTTCAGACTACACTCCTAAAGTAGT
TCACGTTGACGAAAAAAATCGAAAACGTTAA

Upstream 100 bases:

>100_bases
ATACTTTGAATACCAAAATTCACTTTTTTAAGAGGAAAACGCTTTTAAATATCTCTGGTAAAATTTTTAAGGTACTATTT
AGCGAATAGCGGGGCCTAAA

Downstream 100 bases:

>100_bases
TTTTTACCAAAAAACAACTTCCCCTACCTAAGTTCCGGCTTTCAAAGGCCGATATAAATTAGTAAGAATTCCATCGGACC
AGAATAACTATGAAATCTTT

Product: aspartate alpha-decarboxylase

Products: NA

Alternate protein names: Aspartate alpha-decarboxylase [H]

Number of amino acids: Translated: 116; Mature: 116

Protein sequence:

>116_residues
MQITVMKGKIHRATVTDADLNYEGSLTVDMDLVDAAGMRVYEKVSVVNVNNGARFETYIIEGKRGSGEICLNGAAARLGM
KGDKIIIITYAQVEEKELASDYTPKVVHVDEKNRKR

Sequences:

>Translated_116_residues
MQITVMKGKIHRATVTDADLNYEGSLTVDMDLVDAAGMRVYEKVSVVNVNNGARFETYIIEGKRGSGEICLNGAAARLGM
KGDKIIIITYAQVEEKELASDYTPKVVHVDEKNRKR
>Mature_116_residues
MQITVMKGKIHRATVTDADLNYEGSLTVDMDLVDAAGMRVYEKVSVVNVNNGARFETYIIEGKRGSGEICLNGAAARLGM
KGDKIIIITYAQVEEKELASDYTPKVVHVDEKNRKR

Specific function: Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine [H]

COG id: COG0853

COG function: function code H; Aspartate 1-decarboxylase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the panD family [H]

Homologues:

Organism=Escherichia coli, GI1786323, Length=110, Percent_Identity=43.6363636363636, Blast_Score=97, Evalue=3e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009010
- InterPro:   IPR003190
- ProDom:   PD009294 [H]

Pfam domain/function: PF02261 Asp_decarbox [H]

EC number: =4.1.1.11 [H]

Molecular weight: Translated: 12834; Mature: 12834

Theoretical pI: Translated: 7.51; Mature: 7.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQITVMKGKIHRATVTDADLNYEGSLTVDMDLVDAAGMRVYEKVSVVNVNNGARFETYII
CEEEEEECCEEEEEEECCCCCCCCCEEEEEEECCCCCCEEEEEEEEEECCCCCEEEEEEE
EGKRGSGEICLNGAAARLGMKGDKIIIITYAQVEEKELASDYTPKVVHVDEKNRKR
ECCCCCCCEEEECCEEECCCCCCEEEEEEECCCCCHHHCCCCCCEEEEECCCCCCC
>Mature Secondary Structure
MQITVMKGKIHRATVTDADLNYEGSLTVDMDLVDAAGMRVYEKVSVVNVNNGARFETYII
CEEEEEECCEEEEEEECCCCCCCCCEEEEEEECCCCCCEEEEEEEEEECCCCCEEEEEEE
EGKRGSGEICLNGAAARLGMKGDKIIIITYAQVEEKELASDYTPKVVHVDEKNRKR
ECCCCCCCEEEECCEEECCCCCCEEEEEEECCCCCHHHCCCCCCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA