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The map label for this gene is 45657876

Identifier: 45657876

GI number: 45657876

Start: 2440956

End: 2441747

Strand: Reverse

Name: 45657876

Synonym: LIC12024

Alternate gene names: NA

Gene position: 2441747-2440956 (Counterclockwise)

Preceding gene: 45657877

Following gene: 45657875

Centisome position: 57.09

GC content: 34.47

Gene sequence:

>792_bases
ATGGGTCAGAATTTAGCAGTGTCCAATCCGTCTTCTATTGAAGAAACCGCTTGGGAATTATTTGAAACTGGTTCTTATGA
AGAAGTAATCGAGATTGCAAAAAAAAATCCGAATCATGTTTTTTTAAATCATTTGAGTGGGATTGCTGGGTTTGAATCTG
GCTCCAATTACGAAATCAATTATTTTCTAAAGGGTTCTTCGGTTTTGACACCTCTTTTAGAAGCATATCTTTTGAAAGAA
TCTGGAAAGTCCAGGGAAGCAGCCAAAAAGTTTTTAGCATATTTTAGGTCTTCTTCGGTTCCTGTTTCTTATTCGATTTT
AAAAACAGGGATTTTAGTAAGCGAAGACGCGGTGGATTTCAAAACTGTTTTGGATCTGATTTCCGTTTATAAGATTCGTT
TTTCAGACGATTCTTTTTGTAAGTCTGAATTTTTTTCCAACTATCATCTTAGAAATTATAAAGAGGCCATTCAGGTTTTT
GCTGAAAATGTAAAGCGACTTTCGGAAGAAAGAGACGTTATGGGTGCATTAGGGCTTGCTTTTGTTTATATGGGAAAATT
CGACGAAGCAAAGTCAGTTCTCGAAAAAATTCCAGGTTATGAAGAACTTCCAACATTTGACGAAAAGAAAAAAGAATTTT
CAGAAAAAATTGCGAGTATTCCTAAAATGGAAGCAAAACGAAAATCACTTTCGATACAGGAATTGATCGATTTAGGTTTT
GCTTATCTTTTTTCAGAAAATTTTAAAAAGGCTGAAGAAGTTTTTAGTGAGTTGGTTGCGGTTCATCCGTAA

Upstream 100 bases:

>100_bases
ATTGACTCCGCTGCAATCGCTTTCGCATTCGTGATCCCGATTCACTTTTTTTCAGGATTTTCTGCCTAACCCATCCGATA
AGAAACATAGAGGTTATCCT

Downstream 100 bases:

>100_bases
AAGCTTTCTTTTTTAAAAGAAGTTTAAAATTGGTTCAAGTTAGATAGAATTGTAAAATGTTATTTTGTAGAATCAAAAAT
TTAGTATGTATGAATTCTCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 263; Mature: 262

Protein sequence:

>263_residues
MGQNLAVSNPSSIEETAWELFETGSYEEVIEIAKKNPNHVFLNHLSGIAGFESGSNYEINYFLKGSSVLTPLLEAYLLKE
SGKSREAAKKFLAYFRSSSVPVSYSILKTGILVSEDAVDFKTVLDLISVYKIRFSDDSFCKSEFFSNYHLRNYKEAIQVF
AENVKRLSEERDVMGALGLAFVYMGKFDEAKSVLEKIPGYEELPTFDEKKKEFSEKIASIPKMEAKRKSLSIQELIDLGF
AYLFSENFKKAEEVFSELVAVHP

Sequences:

>Translated_263_residues
MGQNLAVSNPSSIEETAWELFETGSYEEVIEIAKKNPNHVFLNHLSGIAGFESGSNYEINYFLKGSSVLTPLLEAYLLKE
SGKSREAAKKFLAYFRSSSVPVSYSILKTGILVSEDAVDFKTVLDLISVYKIRFSDDSFCKSEFFSNYHLRNYKEAIQVF
AENVKRLSEERDVMGALGLAFVYMGKFDEAKSVLEKIPGYEELPTFDEKKKEFSEKIASIPKMEAKRKSLSIQELIDLGF
AYLFSENFKKAEEVFSELVAVHP
>Mature_262_residues
GQNLAVSNPSSIEETAWELFETGSYEEVIEIAKKNPNHVFLNHLSGIAGFESGSNYEINYFLKGSSVLTPLLEAYLLKES
GKSREAAKKFLAYFRSSSVPVSYSILKTGILVSEDAVDFKTVLDLISVYKIRFSDDSFCKSEFFSNYHLRNYKEAIQVFA
ENVKRLSEERDVMGALGLAFVYMGKFDEAKSVLEKIPGYEELPTFDEKKKEFSEKIASIPKMEAKRKSLSIQELIDLGFA
YLFSENFKKAEEVFSELVAVHP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29770; Mature: 29639

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGQNLAVSNPSSIEETAWELFETGSYEEVIEIAKKNPNHVFLNHLSGIAGFESGSNYEIN
CCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCEEHHHHHHHHHCCCCCCCEEEE
YFLKGSSVLTPLLEAYLLKESGKSREAAKKFLAYFRSSSVPVSYSILKTGILVSEDAVDF
EEECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCEECCCHHHH
KTVLDLISVYKIRFSDDSFCKSEFFSNYHLRNYKEAIQVFAENVKRLSEERDVMGALGLA
HHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FVYMGKFDEAKSVLEKIPGYEELPTFDEKKKEFSEKIASIPKMEAKRKSLSIQELIDLGF
HHHHCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHH
AYLFSENFKKAEEVFSELVAVHP
HHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GQNLAVSNPSSIEETAWELFETGSYEEVIEIAKKNPNHVFLNHLSGIAGFESGSNYEIN
CCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCEEHHHHHHHHHCCCCCCCEEEE
YFLKGSSVLTPLLEAYLLKESGKSREAAKKFLAYFRSSSVPVSYSILKTGILVSEDAVDF
EEECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCEECCCHHHH
KTVLDLISVYKIRFSDDSFCKSEFFSNYHLRNYKEAIQVFAENVKRLSEERDVMGALGLA
HHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FVYMGKFDEAKSVLEKIPGYEELPTFDEKKKEFSEKIASIPKMEAKRKSLSIQELIDLGF
HHHHCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHH
AYLFSENFKKAEEVFSELVAVHP
HHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA