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The map label for this gene is 45657825

Identifier: 45657825

GI number: 45657825

Start: 2376430

End: 2377002

Strand: Direct

Name: 45657825

Synonym: LIC11971

Alternate gene names: NA

Gene position: 2376430-2377002 (Clockwise)

Preceding gene: 45657824

Following gene: 45657826

Centisome position: 55.56

GC content: 38.22

Gene sequence:

>573_bases
ATGGATCTTGTAGAAGCAAAAATTTCGGATATTTCTCTGACAAACGTAGGCTTTGCGGTCTTTCTCAAAACGAAGGATGA
TTCCGATTCTAGAGTGGTACCGATTTTTATTGGGCCTTTAGAAACTCATTCCATTACTTCGGTTTTGGATGGAACAAAAC
CACCTAGACCAATGACCCACGATTTAATGACAGTTCTTCTTGGAACTTTAAACGTAAGTATCATTAAAATTTCGATCGAA
GAAATTATAGATAACACCTTTTATGCGAAAATTACTCTCCGCAAAGACGAAGACGTAATCGTATTGGATGCAAGACCAAG
TGATTCCATCGCACTTGCACTCAGAGCAAACGCTCCGATTTATCTCGCTAAAAAAGTAATCGAAGAAGCCGGAATTGAAA
TGAAAGACGAAGAAATTCCAGGCGAATCTATTGCGAGAGAAAAAATTTCCCAACTTCCCAAAACACAATTGGAAATTTTA
CAAGAATCTTTAAACAATGCTCTCAGAACCGAAGACTACGAAACCGCCGCCCGAATTCGAGATCAGATCAAAAAGTTAAT
CGAGAATTCTTAA

Upstream 100 bases:

>100_bases
TGTGCGCTGGCTTTCACGATTGGATCCAAAAATTGGATTAATTTTCCCAGTAAAGTAAAGAATTTGACACCAAAGGATTA
GAAGGATAGCCTCCAAGGGA

Downstream 100 bases:

>100_bases
TTTTCCTGATATAGTTCCAAAAAAGAGACGACTTAGAATCGGTATGAGTTCTACAATCACCGATCAAGCTCAATCAAGGA
GAATCAGATTGGAAAGGTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 190; Mature: 190

Protein sequence:

>190_residues
MDLVEAKISDISLTNVGFAVFLKTKDDSDSRVVPIFIGPLETHSITSVLDGTKPPRPMTHDLMTVLLGTLNVSIIKISIE
EIIDNTFYAKITLRKDEDVIVLDARPSDSIALALRANAPIYLAKKVIEEAGIEMKDEEIPGESIAREKISQLPKTQLEIL
QESLNNALRTEDYETAARIRDQIKKLIENS

Sequences:

>Translated_190_residues
MDLVEAKISDISLTNVGFAVFLKTKDDSDSRVVPIFIGPLETHSITSVLDGTKPPRPMTHDLMTVLLGTLNVSIIKISIE
EIIDNTFYAKITLRKDEDVIVLDARPSDSIALALRANAPIYLAKKVIEEAGIEMKDEEIPGESIAREKISQLPKTQLEIL
QESLNNALRTEDYETAARIRDQIKKLIENS
>Mature_190_residues
MDLVEAKISDISLTNVGFAVFLKTKDDSDSRVVPIFIGPLETHSITSVLDGTKPPRPMTHDLMTVLLGTLNVSIIKISIE
EIIDNTFYAKITLRKDEDVIVLDARPSDSIALALRANAPIYLAKKVIEEAGIEMKDEEIPGESIAREKISQLPKTQLEIL
QESLNNALRTEDYETAARIRDQIKKLIENS

Specific function: Unknown

COG id: COG1259

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003729 [H]

Pfam domain/function: PF02577 DUF151 [H]

EC number: NA

Molecular weight: Translated: 21143; Mature: 21143

Theoretical pI: Translated: 4.57; Mature: 4.57

Prosite motif: PS50151 UVR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLVEAKISDISLTNVGFAVFLKTKDDSDSRVVPIFIGPLETHSITSVLDGTKPPRPMTH
CCCCHHHHCCEEEECCCEEEEEEECCCCCCEEEEEEECCCCHHHHHHHHCCCCCCCCHHH
DLMTVLLGTLNVSIIKISIEEIIDNTFYAKITLRKDEDVIVLDARPSDSIALALRANAPI
HHHHHHHHHCCEEEEEEEHHHHHCCCEEEEEEEECCCCEEEEECCCCCCEEEEEECCCCH
YLAKKVIEEAGIEMKDEEIPGESIAREKISQLPKTQLEILQESLNNALRTEDYETAARIR
HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHH
DQIKKLIENS
HHHHHHHCCC
>Mature Secondary Structure
MDLVEAKISDISLTNVGFAVFLKTKDDSDSRVVPIFIGPLETHSITSVLDGTKPPRPMTH
CCCCHHHHCCEEEECCCEEEEEEECCCCCCEEEEEEECCCCHHHHHHHHCCCCCCCCHHH
DLMTVLLGTLNVSIIKISIEEIIDNTFYAKITLRKDEDVIVLDARPSDSIALALRANAPI
HHHHHHHHHCCEEEEEEEHHHHHCCCEEEEEEEECCCCEEEEECCCCCCEEEEEECCCCH
YLAKKVIEEAGIEMKDEEIPGESIAREKISQLPKTQLEILQESLNNALRTEDYETAARIR
HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHH
DQIKKLIENS
HHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]