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The map label for this gene is ydhD [C]

Identifier: 45657674

GI number: 45657674

Start: 2201717

End: 2202040

Strand: Direct

Name: ydhD [C]

Synonym: LIC11809

Alternate gene names: 45657674

Gene position: 2201717-2202040 (Clockwise)

Preceding gene: 45657673

Following gene: 45657675

Centisome position: 51.48

GC content: 38.58

Gene sequence:

>324_bases
ATGAACAATGACTTAAAACAAAAAATAGACGGTTTAATTGGATCGAATAAGGTCTTTTTATTTATGAAAGGAACTCCAGA
AGCCCCTATGTGTGGTTTTTCCGCCGGTGTGTCTAACGTATTGAGAAGTTTAGGAATTCAATTTGGATCTTTTAATGTTC
TCTCAGACGAAACGATACGCCAAGGAATCAAAGAATATGCAAACTGGCCTACCATCCCACAACTCTACATCAACGGAGAA
TTTATAGGCGGTCACGATATTGTAGTAGAGATGGCTAAAACAGGAGATCTTCAAAAAAAAGCAGGGATCTTAAGCGCAGG
ATGA

Upstream 100 bases:

>100_bases
GTAAATCCATTTTGGAACAACATAGAATGGTTTACGAAACTTTAAAAGAAGAACTAAAACAAGAAGTGCACGCTTTAGCG
TTAGAAACGAGGATACAAGA

Downstream 100 bases:

>100_bases
AGTTATATCACTTTCAATCCTGTCCTTACTGCTCTTACGTAAGAGACGAGTTTCAAAAAATGGGACTCGTCTCTGGCAAA
GATTATGAACTGATAGAGGC

Product: glutaredoxin-related protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 107; Mature: 107

Protein sequence:

>107_residues
MNNDLKQKIDGLIGSNKVFLFMKGTPEAPMCGFSAGVSNVLRSLGIQFGSFNVLSDETIRQGIKEYANWPTIPQLYINGE
FIGGHDIVVEMAKTGDLQKKAGILSAG

Sequences:

>Translated_107_residues
MNNDLKQKIDGLIGSNKVFLFMKGTPEAPMCGFSAGVSNVLRSLGIQFGSFNVLSDETIRQGIKEYANWPTIPQLYINGE
FIGGHDIVVEMAKTGDLQKKAGILSAG
>Mature_107_residues
MNNDLKQKIDGLIGSNKVFLFMKGTPEAPMCGFSAGVSNVLRSLGIQFGSFNVLSDETIRQGIKEYANWPTIPQLYINGE
FIGGHDIVVEMAKTGDLQKKAGILSAG

Specific function: Unknown

COG id: COG0278

COG function: function code O; Glutaredoxin-related protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 glutaredoxin domain [H]

Homologues:

Organism=Homo sapiens, GI42516576, Length=104, Percent_Identity=52.8846153846154, Blast_Score=122, Evalue=7e-29,
Organism=Homo sapiens, GI95113651, Length=97, Percent_Identity=46.3917525773196, Blast_Score=105, Evalue=6e-24,
Organism=Escherichia coli, GI1787943, Length=93, Percent_Identity=45.1612903225806, Blast_Score=100, Evalue=2e-23,
Organism=Caenorhabditis elegans, GI71988153, Length=86, Percent_Identity=55.8139534883721, Blast_Score=111, Evalue=6e-26,
Organism=Caenorhabditis elegans, GI71988159, Length=86, Percent_Identity=55.8139534883721, Blast_Score=111, Evalue=7e-26,
Organism=Caenorhabditis elegans, GI17556042, Length=95, Percent_Identity=44.2105263157895, Blast_Score=107, Evalue=1e-24,
Organism=Saccharomyces cerevisiae, GI6325198, Length=100, Percent_Identity=48, Blast_Score=110, Evalue=5e-26,
Organism=Saccharomyces cerevisiae, GI6320303, Length=83, Percent_Identity=49.3975903614458, Blast_Score=100, Evalue=6e-23,
Organism=Saccharomyces cerevisiae, GI6321022, Length=83, Percent_Identity=50.6024096385542, Blast_Score=100, Evalue=6e-23,
Organism=Drosophila melanogaster, GI24642023, Length=103, Percent_Identity=52.4271844660194, Blast_Score=126, Evalue=3e-30,
Organism=Drosophila melanogaster, GI19921242, Length=94, Percent_Identity=38.2978723404255, Blast_Score=92, Evalue=8e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002109
- InterPro:   IPR014434
- InterPro:   IPR004480
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF00462 Glutaredoxin [H]

EC number: NA

Molecular weight: Translated: 11549; Mature: 11549

Theoretical pI: Translated: 7.35; Mature: 7.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNDLKQKIDGLIGSNKVFLFMKGTPEAPMCGFSAGVSNVLRSLGIQFGSFNVLSDETIR
CCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHH
QGIKEYANWPTIPQLYINGEFIGGHDIVVEMAKTGDLQKKAGILSAG
HHHHHHCCCCCCCEEEECCEEECCHHEEEEECCCCCCHHHCCCCCCC
>Mature Secondary Structure
MNNDLKQKIDGLIGSNKVFLFMKGTPEAPMCGFSAGVSNVLRSLGIQFGSFNVLSDETIR
CCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHH
QGIKEYANWPTIPQLYINGEFIGGHDIVVEMAKTGDLQKKAGILSAG
HHHHHHCCCCCCCEEEECCEEECCHHEEEEECCCCCCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]