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The map label for this gene is yadH

Identifier: 45657670

GI number: 45657670

Start: 2198510

End: 2199283

Strand: Direct

Name: yadH

Synonym: LIC11805

Alternate gene names: 45657670

Gene position: 2198510-2199283 (Clockwise)

Preceding gene: 45657669

Following gene: 45657671

Centisome position: 51.4

GC content: 33.33

Gene sequence:

>774_bases
ATGAATCTATCTGAAAAATACAACGCATTTAAGACCATAGTTATTAAAGAAACCGTTCGAATTCTACGGATCTGGATTCA
GACGATCATTCCTCCTGGAATCACAATCTCACTTTACTTTATTATCTTCGGAAAGTTAGTCGGTTCTCAAATAGGAAACA
TAGGGAATCATACTTATATACAATTTATCGTTCCTGGCCTTGTAATGATGTCTGTGATTATCAATTCGTATAACAATGTA
GTATCTTCCTTTTTCGGTGCTAAGTTTCAAAAAAATGTAGAGGAAATTTTAGTGTCTCCAACTCCCCCATCCTTAATTGT
TTTAGGGTATACAATAGGTGGGGTGATCCGAGGAATTTTAGTGGGAATTTTAGTGATTGCAATTTCTTTATTTTTTACAA
AATTAGAAGTTTATAATTTTCCTATGTTAATTGCTACCGTATTTTTAAGTTCTCTTCTATTTTCAATTGGAGGATTTTTA
AACGCCCTTTACGCCAAGAAATTCGACGACGTGACAATCATTCCTACTTTTATTTTGACTCCTTTGACTTATTTAGGTGG
AGTATTTTATTCCATTCAGATGCTTCCTCCTTTTTGGCAGAACGTTTCCAAATTAAATCCAATTTTATATATGGTAAATT
CGTTCCGTTACGGATTTTTAGGAATCAGTGACATTCATCCTTGGTTTGCGCTTTCTATGATTGGAGCGGCAACCTTATTC
TTTTATATTCTTTCCGTATATCTATTAAAAAAAGGAATTGGAATCCGAAACTAA

Upstream 100 bases:

>100_bases
TATTTAAAATTTTAGATCAGAACGAAATTAAAATTAGTAGTATGAGAAACAAATCCAATCGTTTAGAAGAACTATTCCTG
AAATTGGTAGAGAAAAAATT

Downstream 100 bases:

>100_bases
TCTATGAGTTTTAAAGAAGAAATTCGCTCTCAATTAATTTCTTATTTGAATCCTACTTATATAGAAGTGGAAGATTTTAG
TGCACAACACTCAGGTCACA

Product: ABC transporter permease protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 257; Mature: 257

Protein sequence:

>257_residues
MNLSEKYNAFKTIVIKETVRILRIWIQTIIPPGITISLYFIIFGKLVGSQIGNIGNHTYIQFIVPGLVMMSVIINSYNNV
VSSFFGAKFQKNVEEILVSPTPPSLIVLGYTIGGVIRGILVGILVIAISLFFTKLEVYNFPMLIATVFLSSLLFSIGGFL
NALYAKKFDDVTIIPTFILTPLTYLGGVFYSIQMLPPFWQNVSKLNPILYMVNSFRYGFLGISDIHPWFALSMIGAATLF
FYILSVYLLKKGIGIRN

Sequences:

>Translated_257_residues
MNLSEKYNAFKTIVIKETVRILRIWIQTIIPPGITISLYFIIFGKLVGSQIGNIGNHTYIQFIVPGLVMMSVIINSYNNV
VSSFFGAKFQKNVEEILVSPTPPSLIVLGYTIGGVIRGILVGILVIAISLFFTKLEVYNFPMLIATVFLSSLLFSIGGFL
NALYAKKFDDVTIIPTFILTPLTYLGGVFYSIQMLPPFWQNVSKLNPILYMVNSFRYGFLGISDIHPWFALSMIGAATLF
FYILSVYLLKKGIGIRN
>Mature_257_residues
MNLSEKYNAFKTIVIKETVRILRIWIQTIIPPGITISLYFIIFGKLVGSQIGNIGNHTYIQFIVPGLVMMSVIINSYNNV
VSSFFGAKFQKNVEEILVSPTPPSLIVLGYTIGGVIRGILVGILVIAISLFFTKLEVYNFPMLIATVFLSSLLFSIGGFL
NALYAKKFDDVTIIPTFILTPLTYLGGVFYSIQMLPPFWQNVSKLNPILYMVNSFRYGFLGISDIHPWFALSMIGAATLF
FYILSVYLLKKGIGIRN

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1786320, Length=249, Percent_Identity=55.0200803212851, Blast_Score=289, Evalue=1e-79,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013526
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 28752; Mature: 28752

Theoretical pI: Translated: 10.06; Mature: 10.06

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLSEKYNAFKTIVIKETVRILRIWIQTIIPPGITISLYFIIFGKLVGSQIGNIGNHTYI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHH
QFIVPGLVMMSVIINSYNNVVSSFFGAKFQKNVEEILVSPTPPSLIVLGYTIGGVIRGIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCEEEEHHHHHHHHHHHH
VGILVIAISLFFTKLEVYNFPMLIATVFLSSLLFSIGGFLNALYAKKFDDVTIIPTFILT
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHH
PLTYLGGVFYSIQMLPPFWQNVSKLNPILYMVNSFRYGFLGISDIHPWFALSMIGAATLF
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCHHHHHHHHHHHHHH
FYILSVYLLKKGIGIRN
HHHHHHHHHHHCCCCCC
>Mature Secondary Structure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HHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]