| Definition | Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_005823 |
| Length | 4,277,185 |
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The map label for this gene is fyuA [H]
Identifier: 45657560
GI number: 45657560
Start: 2058318
End: 2060726
Strand: Direct
Name: fyuA [H]
Synonym: LIC11694
Alternate gene names: 45657560
Gene position: 2058318-2060726 (Clockwise)
Preceding gene: 45657559
Following gene: 45657561
Centisome position: 48.12
GC content: 32.13
Gene sequence:
>2409_bases GTGTTCATGTTATATAAGTTTGTTGTTCTATCTTGTTTCCTAAGTGATGCAGTTAGAAAGTATCTTTTAATTTTAAAAAA TACAACTCAGCACATAACTTTAAAAATAAGATTCTTAAATTCTAATGTTATTTTTAATTTTTATAAATCATTTATTAGAA TATTATTATTTATAATAACACTCACTCTTGATGGACAAGAGTCTACCCTCCCTACTTTGAAAGAAGAAGATAAAAAAACT TCTGAAAAAGAAAACGGAATTATGGTTCAGGGTAAAAAAGATAAAAGGGATATTGAAATATTCAAAACCCCGAGTAGTAT TTCTAGATTTAATGAACAGGATATTTTAGATAAAGGTATATCTAGAACTAATGATATTGATAAGCAAGTTCCAAATTTTG CAATCATAGATTCGGGCGCTCGTAATTTTACATATTATAATATTCGAGGAATGAGAAGTACTCTTTTCAGTGACCCTTCC GTTGGTTTGATTGTAGATGGAGTTCCTCTTGTCGATAACGTCGCATTAAACACGGAACTATTTGCACTAGATAGTATCGA AGTTCATAGGGGTTCTCAAGCGACTGTATTTGCAAAAAATTTCCAAGGTGGTGTGATAGAGATTAATACCAAAAAACCGA ATAATATGCCTCAGGGCAGATTTATGGTTGATTGGGGGAATTACAAAAAGAAGGAATATTCTTTTTTTTATAATACGCCT CTAATTAAAAATAAACTCTATATAAGTATTTCAGGAAAATCTACTCAAAGAAATGGATATTTAAATAATGTAAGTGGATT TAATTACCCTAATAATTTAGTTTCTGACATACCAATTGAAGTTCATAAAACACATCCAGATGGACGAAGAGGAAAATCTG GAAGACTTAGATTGTTTTGGACTCCTTTAGAAAATTTAGAAGTCGATTTACAAACAAACGCCGAAAGTTTTGACGACGGC TCCTTAAATATAGTCAATTACCTTGCTTCAAAAACGGAAAGACGCAAAAGCCTAGTAAAAGGATGTGTGGTTAGCCCAGA AGTTTGCGATAAAAATATCCGCACTTATATCAATCGTACGAAAGCAGTTCGAAAAGTGTTTTGGGATTATGAAGGTGTTT CAAATACAACTGGGAAAACATATTCCAGTAATATTACCTATAAATTGCCTAAGGCAATTTTTAAGACAGTTTATAGCATT AGAAAAATGGAAATTGATCCTTTAATTGTGGATGGAGATTTTACAAGAAGTCCGGTAATTAAATCCGAATATATAGAACA TTCCACAACTAGAACTCACGAGACAAGTATAGAATCAAAAAATAAAAAAGAACCATTACAATTTAAAATCGGAACATTAT TTTATCATAAAATATCTGATAAAGAGTTTATTCAAGAACGTTTGATGCAAGCGTATACATATAATGTGCTTAAAGGATTA AATGCTCCCGCTAAAGAGATACATCATTCCAGAGTTGTAGATAAATCTTTCAGTTTTTTTACTCATAATAGTTATACGTT TTGGGAAAAATTTACTCTTACCTTAGGCGCCAGAATTGAAACTCAAAAAATTGGTATAGGTCACAGTCGTGATGCGAGAG GTGTTTTATTCGATAATCCTTATGGAGACGTAAGAATTTTATCCCCCCACTACGTTCGAAACGATTCCTATCGTTACAAC GTTTCTAGAATCATTTTTGATTATAAACCTATAGAGTCTTTGATGATTTTTATCGGTTTAAGTCGCGGATATAAAAACGG AGGATTTAGTACCGTTGTTAATCAACCATCACTGGCTGCATTTAAACCAGAGATCAACGATACACTGGAAGTAGGAATCA AATCTAAATATTTCAACGAAACCTTAGGAATGAATCTCGCTTATTTTTATACGGAAACTGCGGATTTTCATGTAATCAGA GCTATTTCTATAGCTGAGGCTATCAATTTGAACGCCGAAAAAGTTACAATTCGAGGGGCTGAAATGGAAGCCTATCTAAA ACCTCATAAATCATTACAGCTTGGTTTTTTAGCAGGATATACGGAAGGGATTTTTAATAAATTTTATGATCGGATTTTAA ATACAAACTTTGATGGTAAACATGTACATTTTATTCCACAGTATGACGTAGTCAGTTATCTGCAATATCGTTCTTCGCCA GGTTTGTTTTTCAGATATGAATTTCAAGTTGTAGGTAAGATGTATTTTGCCGCAGATAATACGATCTATAGCAGTCCTTA TGCGATCACGAATCTGAAAATAGGATACGAAGAAGAACGTTTATCTGCTTACCTTTATTGTAATAACATCAATAATGAAT ATTATTTTACTTCCTATATAGACGGTACTTTTCAAGCAGTCCCAGGAGCACCACGGACTTATGGATTTATTGTAAATTAT AAAATATAA
Upstream 100 bases:
>100_bases TTCTCAACCGAAAACTTTCATTTGATCCATTTTTAACATAATTGATTTTGAGTCCTAAAATCATATATCCTCTTTACAAA TAAAACAACTTATTTCTAAT
Downstream 100 bases:
>100_bases ATAAAGTTTAAGGAGATTTAAATTCAATGAAAAAAATGATAAGGGTAGTATTGGCGGTCGTTTTGATGATCACTAACTTA TCTTTTTGTAAGCAGGAGGA
Product: TonB-dependent outer membrane receptor
Products: NA
Alternate protein names: IPR65; IRPC [H]
Number of amino acids: Translated: 802; Mature: 802
Protein sequence:
>802_residues MFMLYKFVVLSCFLSDAVRKYLLILKNTTQHITLKIRFLNSNVIFNFYKSFIRILLFIITLTLDGQESTLPTLKEEDKKT SEKENGIMVQGKKDKRDIEIFKTPSSISRFNEQDILDKGISRTNDIDKQVPNFAIIDSGARNFTYYNIRGMRSTLFSDPS VGLIVDGVPLVDNVALNTELFALDSIEVHRGSQATVFAKNFQGGVIEINTKKPNNMPQGRFMVDWGNYKKKEYSFFYNTP LIKNKLYISISGKSTQRNGYLNNVSGFNYPNNLVSDIPIEVHKTHPDGRRGKSGRLRLFWTPLENLEVDLQTNAESFDDG SLNIVNYLASKTERRKSLVKGCVVSPEVCDKNIRTYINRTKAVRKVFWDYEGVSNTTGKTYSSNITYKLPKAIFKTVYSI RKMEIDPLIVDGDFTRSPVIKSEYIEHSTTRTHETSIESKNKKEPLQFKIGTLFYHKISDKEFIQERLMQAYTYNVLKGL NAPAKEIHHSRVVDKSFSFFTHNSYTFWEKFTLTLGARIETQKIGIGHSRDARGVLFDNPYGDVRILSPHYVRNDSYRYN VSRIIFDYKPIESLMIFIGLSRGYKNGGFSTVVNQPSLAAFKPEINDTLEVGIKSKYFNETLGMNLAYFYTETADFHVIR AISIAEAINLNAEKVTIRGAEMEAYLKPHKSLQLGFLAGYTEGIFNKFYDRILNTNFDGKHVHFIPQYDVVSYLQYRSSP GLFFRYEFQVVGKMYFAADNTIYSSPYAITNLKIGYEEERLSAYLYCNNINNEYYFTSYIDGTFQAVPGAPRTYGFIVNY KI
Sequences:
>Translated_802_residues MFMLYKFVVLSCFLSDAVRKYLLILKNTTQHITLKIRFLNSNVIFNFYKSFIRILLFIITLTLDGQESTLPTLKEEDKKT SEKENGIMVQGKKDKRDIEIFKTPSSISRFNEQDILDKGISRTNDIDKQVPNFAIIDSGARNFTYYNIRGMRSTLFSDPS VGLIVDGVPLVDNVALNTELFALDSIEVHRGSQATVFAKNFQGGVIEINTKKPNNMPQGRFMVDWGNYKKKEYSFFYNTP LIKNKLYISISGKSTQRNGYLNNVSGFNYPNNLVSDIPIEVHKTHPDGRRGKSGRLRLFWTPLENLEVDLQTNAESFDDG SLNIVNYLASKTERRKSLVKGCVVSPEVCDKNIRTYINRTKAVRKVFWDYEGVSNTTGKTYSSNITYKLPKAIFKTVYSI RKMEIDPLIVDGDFTRSPVIKSEYIEHSTTRTHETSIESKNKKEPLQFKIGTLFYHKISDKEFIQERLMQAYTYNVLKGL NAPAKEIHHSRVVDKSFSFFTHNSYTFWEKFTLTLGARIETQKIGIGHSRDARGVLFDNPYGDVRILSPHYVRNDSYRYN VSRIIFDYKPIESLMIFIGLSRGYKNGGFSTVVNQPSLAAFKPEINDTLEVGIKSKYFNETLGMNLAYFYTETADFHVIR AISIAEAINLNAEKVTIRGAEMEAYLKPHKSLQLGFLAGYTEGIFNKFYDRILNTNFDGKHVHFIPQYDVVSYLQYRSSP GLFFRYEFQVVGKMYFAADNTIYSSPYAITNLKIGYEEERLSAYLYCNNINNEYYFTSYIDGTFQAVPGAPRTYGFIVNY KI >Mature_802_residues MFMLYKFVVLSCFLSDAVRKYLLILKNTTQHITLKIRFLNSNVIFNFYKSFIRILLFIITLTLDGQESTLPTLKEEDKKT SEKENGIMVQGKKDKRDIEIFKTPSSISRFNEQDILDKGISRTNDIDKQVPNFAIIDSGARNFTYYNIRGMRSTLFSDPS VGLIVDGVPLVDNVALNTELFALDSIEVHRGSQATVFAKNFQGGVIEINTKKPNNMPQGRFMVDWGNYKKKEYSFFYNTP LIKNKLYISISGKSTQRNGYLNNVSGFNYPNNLVSDIPIEVHKTHPDGRRGKSGRLRLFWTPLENLEVDLQTNAESFDDG SLNIVNYLASKTERRKSLVKGCVVSPEVCDKNIRTYINRTKAVRKVFWDYEGVSNTTGKTYSSNITYKLPKAIFKTVYSI RKMEIDPLIVDGDFTRSPVIKSEYIEHSTTRTHETSIESKNKKEPLQFKIGTLFYHKISDKEFIQERLMQAYTYNVLKGL NAPAKEIHHSRVVDKSFSFFTHNSYTFWEKFTLTLGARIETQKIGIGHSRDARGVLFDNPYGDVRILSPHYVRNDSYRYN VSRIIFDYKPIESLMIFIGLSRGYKNGGFSTVVNQPSLAAFKPEINDTLEVGIKSKYFNETLGMNLAYFYTETADFHVIR AISIAEAINLNAEKVTIRGAEMEAYLKPHKSLQLGFLAGYTEGIFNKFYDRILNTNFDGKHVHFIPQYDVVSYLQYRSSP GLFFRYEFQVVGKMYFAADNTIYSSPYAITNLKIGYEEERLSAYLYCNNINNEYYFTSYIDGTFQAVPGAPRTYGFIVNY KI
Specific function: Receptor for the bacteriocin pesticin and for the siderophore yersiniabactin [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell outer membrane [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR000531 - InterPro: IPR010105 [H]
Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 92266; Mature: 92266
Theoretical pI: Translated: 9.60; Mature: 9.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFMLYKFVVLSCFLSDAVRKYLLILKNTTQHITLKIRFLNSNVIFNFYKSFIRILLFIIT CHHHHHHHHHHHHHHHHHHHHHHHEECCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHH LTLDGQESTLPTLKEEDKKTSEKENGIMVQGKKDKRDIEIFKTPSSISRFNEQDILDKGI EEECCCCCCCCCCHHHHHHCCHHHCCEEEECCCCCCCEEEEECCHHHHHCCHHHHHHHCC SRTNDIDKQVPNFAIIDSGARNFTYYNIRGMRSTLFSDPSVGLIVDGVPLVDNVALNTEL CCCCCHHHHCCCEEEEECCCCCEEEEEEECHHHHHCCCCCCEEEECCCCCCCCEEECEEE FALDSIEVHRGSQATVFAKNFQGGVIEINTKKPNNMPQGRFMVDWGNYKKKEYSFFYNTP EEECCEEEECCCCEEEEEECCCCCEEEEECCCCCCCCCCCEEEECCCCCCEEEEEEECCC LIKNKLYISISGKSTQRNGYLNNVSGFNYPNNLVSDIPIEVHKTHPDGRRGKSGRLRLFW EECCEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHCCCEEEEECCCCCCCCCCCCEEEEE TPLENLEVDLQTNAESFDDGSLNIVNYLASKTERRKSLVKGCVVSPEVCDKNIRTYINRT ECCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH KAVRKVFWDYEGVSNTTGKTYSSNITYKLPKAIFKTVYSIRKMEIDPLIVDGDFTRSPVI HHHHHHHHCCCCCCCCCCCEECCCCEEECHHHHHHHHHHHHHCCCCEEEECCCCCCCCCH KSEYIEHSTTRTHETSIESKNKKEPLQFKIGTLFYHKISDKEFIQERLMQAYTYNVLKGL HHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHCC NAPAKEIHHSRVVDKSFSFFTHNSYTFWEKFTLTLGARIETQKIGIGHSRDARGVLFDNP CCCHHHHHHHHHHHCCCEEEECCCEEEEEEEEEEECCEEEEEEECCCCCCCCCEEEEECC YGDVRILSPHYVRNDSYRYNVSRIIFDYKPIESLMIFIGLSRGYKNGGFSTVVNQPSLAA CCCEEEECCCEEECCCEEEEEEEEEEECCCHHHEEEEEECCCCCCCCCCEEEECCCCCEE FKPEINDTLEVGIKSKYFNETLGMNLAYFYTETADFHVIRAISIAEAINLNAEKVTIRGA ECCCCCCCEEECCCHHHHHHHHCCEEEEEEECCCCEEEEEHHHHHHHHCCCCEEEEEECC EMEAYLKPHKSLQLGFLAGYTEGIFNKFYDRILNTNFDGKHVHFIPQYDVVSYLQYRSSP CEEEECCCCCCEEEEEEHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHCCCC GLFFRYEFQVVGKMYFAADNTIYSSPYAITNLKIGYEEERLSAYLYCNNINNEYYFTSYI CEEEEEEEEEEEEEEEEECCCEECCCEEEEEEEECCCCCCEEEEEEEECCCCCEEEEEEE DGTFQAVPGAPRTYGFIVNYKI CCEEEECCCCCCEEEEEEEEEC >Mature Secondary Structure MFMLYKFVVLSCFLSDAVRKYLLILKNTTQHITLKIRFLNSNVIFNFYKSFIRILLFIIT CHHHHHHHHHHHHHHHHHHHHHHHEECCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHH LTLDGQESTLPTLKEEDKKTSEKENGIMVQGKKDKRDIEIFKTPSSISRFNEQDILDKGI EEECCCCCCCCCCHHHHHHCCHHHCCEEEECCCCCCCEEEEECCHHHHHCCHHHHHHHCC SRTNDIDKQVPNFAIIDSGARNFTYYNIRGMRSTLFSDPSVGLIVDGVPLVDNVALNTEL CCCCCHHHHCCCEEEEECCCCCEEEEEEECHHHHHCCCCCCEEEECCCCCCCCEEECEEE FALDSIEVHRGSQATVFAKNFQGGVIEINTKKPNNMPQGRFMVDWGNYKKKEYSFFYNTP EEECCEEEECCCCEEEEEECCCCCEEEEECCCCCCCCCCCEEEECCCCCCEEEEEEECCC LIKNKLYISISGKSTQRNGYLNNVSGFNYPNNLVSDIPIEVHKTHPDGRRGKSGRLRLFW EECCEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHCCCEEEEECCCCCCCCCCCCEEEEE TPLENLEVDLQTNAESFDDGSLNIVNYLASKTERRKSLVKGCVVSPEVCDKNIRTYINRT ECCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH KAVRKVFWDYEGVSNTTGKTYSSNITYKLPKAIFKTVYSIRKMEIDPLIVDGDFTRSPVI HHHHHHHHCCCCCCCCCCCEECCCCEEECHHHHHHHHHHHHHCCCCEEEECCCCCCCCCH KSEYIEHSTTRTHETSIESKNKKEPLQFKIGTLFYHKISDKEFIQERLMQAYTYNVLKGL HHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHCC NAPAKEIHHSRVVDKSFSFFTHNSYTFWEKFTLTLGARIETQKIGIGHSRDARGVLFDNP CCCHHHHHHHHHHHCCCEEEECCCEEEEEEEEEEECCEEEEEEECCCCCCCCCEEEEECC YGDVRILSPHYVRNDSYRYNVSRIIFDYKPIESLMIFIGLSRGYKNGGFSTVVNQPSLAA CCCEEEECCCEEECCCEEEEEEEEEEECCCHHHEEEEEECCCCCCCCCCEEEECCCCCEE FKPEINDTLEVGIKSKYFNETLGMNLAYFYTETADFHVIRAISIAEAINLNAEKVTIRGA ECCCCCCCEEECCCHHHHHHHHCCEEEEEEECCCCEEEEEHHHHHHHHCCCCEEEEEECC EMEAYLKPHKSLQLGFLAGYTEGIFNKFYDRILNTNFDGKHVHFIPQYDVVSYLQYRSSP CEEEECCCCCCEEEEEEHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHCCCC GLFFRYEFQVVGKMYFAADNTIYSSPYAITNLKIGYEEERLSAYLYCNNINNEYYFTSYI CEEEEEEEEEEEEEEEEECCCEECCCEEEEEEEECCCCCCEEEEEEEECCCCCEEEEEEE DGTFQAVPGAPRTYGFIVNYKI CCEEEECCCCCCEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA