Click here to switch to the map view.

The map label for this gene is tal

Identifier: 45657522

GI number: 45657522

Start: 2017973

End: 2018617

Strand: Reverse

Name: tal

Synonym: LIC11652

Alternate gene names: 45657522

Gene position: 2018617-2017973 (Counterclockwise)

Preceding gene: 45657523

Following gene: 45657521

Centisome position: 47.19

GC content: 39.07

Gene sequence:

>645_bases
ATGGAATTATATCTAGATACGGCAAACGTAGATGAAATTAAAGAAATTGCATCTTACGGACTTGTAGATGGAGTCACAAC
CAACCCTTCTCTGATCGCAAAGTCTGGAAGAAGTTTTAAAGAAGTAATCAAAGAAATTTGTTCGATCGTTTCTGGCCCAG
TGAGCGCGGAAGTACTTTCTACAAAATTCGATGGAATGATGAAAGAAGCACTCGAACTCGTAGAAATTGCCGAAAACGTA
GTGATCAAGGTTCCTTTGATTCCGGAAGGACTCAAAACAGTCGTAGAATTAACAAAAAGAAATATTCCTACAAATGTAAC
TCTTTGTTTTTCCGCACCTCAAGCTTTACTTGCAGCCAAAGCGGGAGCTACCTTTATTTCTCCGTTTATTGGTAGAGTGG
ATGATACTAGCTGGGACGGGATGGAACTCATTTCCGAAATTAGAGAAATTTATGATAATTACGGATACGACACTAGAATT
TTAGCAGCTTCCATTCGTGGCCCAATACATTTAAAAGAATCTGCACTCAGAGGTGCAGACTGCGCGACAATGCCCCATTC
TGCGTTTTTACAACTTTTCAAACATCCGTTAACCGACATCGGTCTGGAAAAATTTTTAGAAGATTCTAAAAAACTAAAGT
GGTAA

Upstream 100 bases:

>100_bases
GAATTTAAGAAGTGTTGTTTCTGGATAAAAGAAAATTCTATTGACCTTACTCCAGCTTTTTAACCATGATCTAAGCATCC
TATTTTTATGGAGCTTATAG

Downstream 100 bases:

>100_bases
TTAAACAGACGCACGATTTTAGAATTTTCTAAATCGTGCGAATTTTAGGATCACAATTTTTAACCCAAATACATACTTTT
AAAAAGGTTCTTTTTAATTT

Product: putative translaldolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 214; Mature: 214

Protein sequence:

>214_residues
MELYLDTANVDEIKEIASYGLVDGVTTNPSLIAKSGRSFKEVIKEICSIVSGPVSAEVLSTKFDGMMKEALELVEIAENV
VIKVPLIPEGLKTVVELTKRNIPTNVTLCFSAPQALLAAKAGATFISPFIGRVDDTSWDGMELISEIREIYDNYGYDTRI
LAASIRGPIHLKESALRGADCATMPHSAFLQLFKHPLTDIGLEKFLEDSKKLKW

Sequences:

>Translated_214_residues
MELYLDTANVDEIKEIASYGLVDGVTTNPSLIAKSGRSFKEVIKEICSIVSGPVSAEVLSTKFDGMMKEALELVEIAENV
VIKVPLIPEGLKTVVELTKRNIPTNVTLCFSAPQALLAAKAGATFISPFIGRVDDTSWDGMELISEIREIYDNYGYDTRI
LAASIRGPIHLKESALRGADCATMPHSAFLQLFKHPLTDIGLEKFLEDSKKLKW
>Mature_214_residues
MELYLDTANVDEIKEIASYGLVDGVTTNPSLIAKSGRSFKEVIKEICSIVSGPVSAEVLSTKFDGMMKEALELVEIAENV
VIKVPLIPEGLKTVVELTKRNIPTNVTLCFSAPQALLAAKAGATFISPFIGRVDDTSWDGMELISEIREIYDNYGYDTRI
LAASIRGPIHLKESALRGADCATMPHSAFLQLFKHPLTDIGLEKFLEDSKKLKW

Specific function: Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway [H]

COG id: COG0176

COG function: function code G; Transaldolase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transaldolase family. Type 3B subfamily [H]

Homologues:

Organism=Homo sapiens, GI5803187, Length=205, Percent_Identity=29.7560975609756, Blast_Score=69, Evalue=2e-12,
Organism=Escherichia coli, GI87081788, Length=210, Percent_Identity=32.3809523809524, Blast_Score=130, Evalue=5e-32,
Organism=Escherichia coli, GI1790382, Length=210, Percent_Identity=36.1904761904762, Blast_Score=116, Evalue=9e-28,
Organism=Escherichia coli, GI1788807, Length=197, Percent_Identity=29.4416243654822, Blast_Score=68, Evalue=4e-13,
Organism=Escherichia coli, GI1786189, Length=148, Percent_Identity=31.0810810810811, Blast_Score=65, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI25153750, Length=186, Percent_Identity=32.258064516129, Blast_Score=64, Evalue=4e-11,
Organism=Saccharomyces cerevisiae, GI6321480, Length=199, Percent_Identity=33.1658291457286, Blast_Score=80, Evalue=4e-16,
Organism=Drosophila melanogaster, GI45549185, Length=209, Percent_Identity=29.1866028708134, Blast_Score=67, Evalue=9e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR001585
- InterPro:   IPR004731
- InterPro:   IPR022999
- InterPro:   IPR018225 [H]

Pfam domain/function: PF00923 Transaldolase [H]

EC number: =2.2.1.2 [H]

Molecular weight: Translated: 23490; Mature: 23490

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: PS01054 TRANSALDOLASE_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELYLDTANVDEIKEIASYGLVDGVTTNPSLIAKSGRSFKEVIKEICSIVSGPVSAEVLS
CEEEECCCCHHHHHHHHHHCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHH
TKFDGMMKEALELVEIAENVVIKVPLIPEGLKTVVELTKRNIPTNVTLCFSAPQALLAAK
HHHHHHHHHHHHHHHHHHHCEEEECCCCHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHH
AGATFISPFIGRVDDTSWDGMELISEIREIYDNYGYDTRILAASIRGPIHLKESALRGAD
CCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEHHHHHCCCC
CATMPHSAFLQLFKHPLTDIGLEKFLEDSKKLKW
CCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MELYLDTANVDEIKEIASYGLVDGVTTNPSLIAKSGRSFKEVIKEICSIVSGPVSAEVLS
CEEEECCCCHHHHHHHHHHCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHH
TKFDGMMKEALELVEIAENVVIKVPLIPEGLKTVVELTKRNIPTNVTLCFSAPQALLAAK
HHHHHHHHHHHHHHHHHHHCEEEECCCCHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHH
AGATFISPFIGRVDDTSWDGMELISEIREIYDNYGYDTRILAASIRGPIHLKESALRGAD
CCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEHHHHHCCCC
CATMPHSAFLQLFKHPLTDIGLEKFLEDSKKLKW
CCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA