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The map label for this gene is 45657346

Identifier: 45657346

GI number: 45657346

Start: 1819711

End: 1820070

Strand: Reverse

Name: 45657346

Synonym: LIC11471

Alternate gene names: NA

Gene position: 1820070-1819711 (Counterclockwise)

Preceding gene: 45657347

Following gene: 45657345

Centisome position: 42.55

GC content: 37.5

Gene sequence:

>360_bases
ATGGGTGATTGTAAAAGATTCTCATCTGCAAAACAAGCGGTTTACTATGCTGGCTTAGTTCCCAGAGTTGACATTTCTGG
AGACACAGTTCGATACGGAAGAATCATAAATCGAGGTTGTCATTCAATTCGAAGGGTGATTGTTCAAGCGGCTTGGAGTC
TGGTTCGTTGTCAACACGGTGGTAAGGTAAAAGAGTTCTATCAAAGGTTATACCTTAAAAAAGGTGCTAAAAAATCGATC
ATCGCTACTTCACGTAAAATGATCGAAGTTCTTTACGTAATGATTCGAACCGGAAAACTTTTCGATTCTATGCCTGAGAA
TATATTAAATCGAAAATTAACTCAATATGGTCTTATGTAA

Upstream 100 bases:

>100_bases
TTCAGACGATCATGTCTATGCCTGGAATTGGAATGATTACTTCTTTGGCAATCAAAGCAAACTCAATATCTCACTCCCTA
TGGGTCGTTCGATAAGTTAC

Downstream 100 bases:

>100_bases
AAAAAAATAACGGGAGGGCTTGACACAAGAAACATAGGAGAGAGCCATAACCAACCCCATAAGTTGAATAGGATTTTAGA
ATCAGAAGAATTAAAAACGC

Product: transposase, ISlin1

Products: NA

Alternate protein names: ISlin1 Transposase

Number of amino acids: Translated: 119; Mature: 118

Protein sequence:

>119_residues
MGDCKRFSSAKQAVYYAGLVPRVDISGDTVRYGRIINRGCHSIRRVIVQAAWSLVRCQHGGKVKEFYQRLYLKKGAKKSI
IATSRKMIEVLYVMIRTGKLFDSMPENILNRKLTQYGLM

Sequences:

>Translated_119_residues
MGDCKRFSSAKQAVYYAGLVPRVDISGDTVRYGRIINRGCHSIRRVIVQAAWSLVRCQHGGKVKEFYQRLYLKKGAKKSI
IATSRKMIEVLYVMIRTGKLFDSMPENILNRKLTQYGLM
>Mature_118_residues
GDCKRFSSAKQAVYYAGLVPRVDISGDTVRYGRIINRGCHSIRRVIVQAAWSLVRCQHGGKVKEFYQRLYLKKGAKKSII
ATSRKMIEVLYVMIRTGKLFDSMPENILNRKLTQYGLM

Specific function: Unknown

COG id: COG3547

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13647; Mature: 13516

Theoretical pI: Translated: 10.85; Mature: 10.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGDCKRFSSAKQAVYYAGLVPRVDISGDTVRYGRIINRGCHSIRRVIVQAAWSLVRCQHG
CCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GKVKEFYQRLYLKKGAKKSIIATSRKMIEVLYVMIRTGKLFDSMPENILNRKLTQYGLM
CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GDCKRFSSAKQAVYYAGLVPRVDISGDTVRYGRIINRGCHSIRRVIVQAAWSLVRCQHG
CCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GKVKEFYQRLYLKKGAKKSIIATSRKMIEVLYVMIRTGKLFDSMPENILNRKLTQYGLM
CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA