Click here to switch to the map view.

The map label for this gene is 45657338

Identifier: 45657338

GI number: 45657338

Start: 1805167

End: 1806276

Strand: Reverse

Name: 45657338

Synonym: LIC11463

Alternate gene names: NA

Gene position: 1806276-1805167 (Counterclockwise)

Preceding gene: 45657340

Following gene: 45657327

Centisome position: 42.23

GC content: 35.59

Gene sequence:

>1110_bases
ATGAGATTACTTCAAATTATTTTTAAAATTTTAATATTCTTTCTTTGTATTTTACAATTTTTCTACTGTAAACCAAAAGC
AGAAAATACAAATACAGTAGAAGACATTTTAAAAAGTGTTGGATTTTCTTTTTGGGACGAATTCAACCACGAACTTTATA
AATTCATTCCCATTTCTTCTATTGTTTCCAAAAACGATTTTATAATAGATCAATTCACAATTGCCAATCCTGATTTAAAG
GTTAATAAACCGAAAGTTATTTTGATTCACGGCTGGGACTTTGAAGAAAGAAATTTCGAACTTCCTACTACCAAAGCTAA
AAAAGTTGCAAATATTAGAAAAATCTGGGGCGATGCTCTGGAAATGTATTCTCAAAATCTTTTCGAAACTCAGACAACTT
ATGAATTTTATACTTTTACGTATCGAACTTCGGACTACGTGGAACATAACGGTAGAAGACTGATCGATAAACTGAATTCA
GTTTTTACTCCCGACGATAAGGTAATTTTGTTAGCTCATTCTATGGGTGGTCTTGTTGCTAGATCCGCTCTTTATCACCC
TAACAACACAAACGACGTTATTGATTTTATTGTAAGTCTTGGAACTCCTTACTTAGGTTCTCCTTTTGCTTCTCCTAGCT
ATAGAAAACATTTAGGAGCGTTAGGTGAACTAATCGGATTTGTGACCGGAACGGCGGGCGGAAAAGACCTTGCTTATACA
AACGCGTTAGGCACATCGTATCAGGTTCCTGAAAGTGAAATTATTCCAGACGCTTCTAATGCCTACTTAGAAAGACTTTT
AAGTGAATCTTCTAAAGACTCAAAAGTTACTGCGTTTTATGGTGAAATGTCTCAGTGTAAGGGTCACCCAGGTTCCGGGA
CTGCTTTTATCATCGGTTGTGATATTTTAAAAGATGAAGTACCTAGCTTTGCCGGTAAGAACGATGGAATAGTTACTTCC
ACCAGTGGCAAAATGTCTTCTAAACTTCCACCCGAAAGACAATTCGTAAAAGATTTAGATCACTACCAGTTATCATTTAG
CAGCCACGCCAGTGTTGCTTCTAGAAACACATATTTTGGAGAAGTTATAGCTATCATTGACTCATTGTAG

Upstream 100 bases:

>100_bases
AATTTAAATAATATACTTAAGTATAGAATTATTCTTAAATAAACTTTGAGTTTTTAAATTTTCACTTGCGCATATCTGCT
CATATTCGTTTATCAAAAAT

Downstream 100 bases:

>100_bases
TAAATAAATTTAAAAAGAACGCGAATCATATCTCGTAAATGAACACTGGGCTTATGAAGTACATCCCACTGAATTTTAAA
CATGAGTAAATTATATTTTA

Product: hypothetical protein

Products: NA

Alternate protein names: Hydrolase Or Acyltransferase; Esterase/Lipase; Lipoprotein

Number of amino acids: Translated: 369; Mature: 369

Protein sequence:

>369_residues
MRLLQIIFKILIFFLCILQFFYCKPKAENTNTVEDILKSVGFSFWDEFNHELYKFIPISSIVSKNDFIIDQFTIANPDLK
VNKPKVILIHGWDFEERNFELPTTKAKKVANIRKIWGDALEMYSQNLFETQTTYEFYTFTYRTSDYVEHNGRRLIDKLNS
VFTPDDKVILLAHSMGGLVARSALYHPNNTNDVIDFIVSLGTPYLGSPFASPSYRKHLGALGELIGFVTGTAGGKDLAYT
NALGTSYQVPESEIIPDASNAYLERLLSESSKDSKVTAFYGEMSQCKGHPGSGTAFIIGCDILKDEVPSFAGKNDGIVTS
TSGKMSSKLPPERQFVKDLDHYQLSFSSHASVASRNTYFGEVIAIIDSL

Sequences:

>Translated_369_residues
MRLLQIIFKILIFFLCILQFFYCKPKAENTNTVEDILKSVGFSFWDEFNHELYKFIPISSIVSKNDFIIDQFTIANPDLK
VNKPKVILIHGWDFEERNFELPTTKAKKVANIRKIWGDALEMYSQNLFETQTTYEFYTFTYRTSDYVEHNGRRLIDKLNS
VFTPDDKVILLAHSMGGLVARSALYHPNNTNDVIDFIVSLGTPYLGSPFASPSYRKHLGALGELIGFVTGTAGGKDLAYT
NALGTSYQVPESEIIPDASNAYLERLLSESSKDSKVTAFYGEMSQCKGHPGSGTAFIIGCDILKDEVPSFAGKNDGIVTS
TSGKMSSKLPPERQFVKDLDHYQLSFSSHASVASRNTYFGEVIAIIDSL
>Mature_369_residues
MRLLQIIFKILIFFLCILQFFYCKPKAENTNTVEDILKSVGFSFWDEFNHELYKFIPISSIVSKNDFIIDQFTIANPDLK
VNKPKVILIHGWDFEERNFELPTTKAKKVANIRKIWGDALEMYSQNLFETQTTYEFYTFTYRTSDYVEHNGRRLIDKLNS
VFTPDDKVILLAHSMGGLVARSALYHPNNTNDVIDFIVSLGTPYLGSPFASPSYRKHLGALGELIGFVTGTAGGKDLAYT
NALGTSYQVPESEIIPDASNAYLERLLSESSKDSKVTAFYGEMSQCKGHPGSGTAFIIGCDILKDEVPSFAGKNDGIVTS
TSGKMSSKLPPERQFVKDLDHYQLSFSSHASVASRNTYFGEVIAIIDSL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41374; Mature: 41374

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLLQIIFKILIFFLCILQFFYCKPKAENTNTVEDILKSVGFSFWDEFNHELYKFIPISS
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHCCHHH
IVSKNDFIIDQFTIANPDLKVNKPKVILIHGWDFEERNFELPTTKAKKVANIRKIWGDAL
HHCCCCEEEEEEEECCCCEEECCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
EMYSQNLFETQTTYEFYTFTYRTSDYVEHNGRRLIDKLNSVFTPDDKVILLAHSMGGLVA
HHHHHHHHHCCCCEEEEEEEEECHHHHHHCHHHHHHHHHHCCCCCCCEEEEEECCCHHHH
RSALYHPNNTNDVIDFIVSLGTPYLGSPFASPSYRKHLGALGELIGFVTGTAGGKDLAYT
HHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEE
NALGTSYQVPESEIIPDASNAYLERLLSESSKDSKVTAFYGEMSQCKGHPGSGTAFIIGC
CCCCCCCCCCCHHCCCCCHHHHHHHHHHCCCCCCEEEEEECCHHHHCCCCCCCCEEEEEH
DILKDEVPSFAGKNDGIVTSTSGKMSSKLPPERQFVKDLDHYQLSFSSHASVASRNTYFG
HHHHHHCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHEEECCCCCCHHHCCCHHH
EVIAIIDSL
HHHHHHHCC
>Mature Secondary Structure
MRLLQIIFKILIFFLCILQFFYCKPKAENTNTVEDILKSVGFSFWDEFNHELYKFIPISS
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHCCHHH
IVSKNDFIIDQFTIANPDLKVNKPKVILIHGWDFEERNFELPTTKAKKVANIRKIWGDAL
HHCCCCEEEEEEEECCCCEEECCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
EMYSQNLFETQTTYEFYTFTYRTSDYVEHNGRRLIDKLNSVFTPDDKVILLAHSMGGLVA
HHHHHHHHHCCCCEEEEEEEEECHHHHHHCHHHHHHHHHHCCCCCCCEEEEEECCCHHHH
RSALYHPNNTNDVIDFIVSLGTPYLGSPFASPSYRKHLGALGELIGFVTGTAGGKDLAYT
HHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEE
NALGTSYQVPESEIIPDASNAYLERLLSESSKDSKVTAFYGEMSQCKGHPGSGTAFIIGC
CCCCCCCCCCCHHCCCCCHHHHHHHHHHCCCCCCEEEEEECCHHHHCCCCCCCCEEEEEH
DILKDEVPSFAGKNDGIVTSTSGKMSSKLPPERQFVKDLDHYQLSFSSHASVASRNTYFG
HHHHHHCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHEEECCCCCCHHHCCCHHH
EVIAIIDSL
HHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA