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The map label for this gene is 45657325

Identifier: 45657325

GI number: 45657325

Start: 1787130

End: 1787717

Strand: Reverse

Name: 45657325

Synonym: LIC11449

Alternate gene names: NA

Gene position: 1787717-1787130 (Counterclockwise)

Preceding gene: 45657326

Following gene: 45657324

Centisome position: 41.8

GC content: 36.56

Gene sequence:

>588_bases
ATGAATCGCTCGATTGGATCTCAATCTTTTAGAATTGCAAAATCAATATTAAACAAAGGGGTTCAAGTAATTGTCCTGAA
CCCAGGCAACCTGGCCACAATCTATCAGTCGTTGAAAAAAACTGATAAAGAGGATTCACTTAAAATAGCAAGATTGATTC
AACGTCATCCAATAGAAGAGTTACCTACTGTTCCAATTCCAAATGATGAAGAGGAAGACAATCGCAGACTTTGTTCGGAA
CATGAGAATTGGACAAAACAACTAACGCAAGGAAAGAATCGGCTTCATAGTTTATTCACCCAAGCCGGTTTGACTCAGAT
CACCAAAAAACACTTACGAACAAAAGTATCTAGAGAAGCTTCTGTGACTTTACTTTCCGATCGATACAAAAAGGAAGCAG
AAAGAATATTAAAAGTTTTAGATTTAGTCGAACTAAATCTAAAACTCGTAGAAGAAGAAATTCAAGAAGCTCTCAAAAAA
AACAAAGCCTATGTTCAGACGATCATGTCTATGCCTGGAATTGGAATGATTACTTCTTTGGCAATCAAAGCAAACTCAAT
ATCTCACTCCCTATGGGTCGTTCGATAA

Upstream 100 bases:

>100_bases
TTACAATGGTTGACCTTGAATGACATTGTAGGTCTGGATTTCTGAGCTTCGCTAAGAGCCAACAGCAACGCTTCGCTGCT
TTTTGGCAATCTCGCTCACC

Downstream 100 bases:

>100_bases
GTTACATGGGTGATTGTAAAAGATTCTCATCTGCAAAACAAGCGGCTTACTATGCTGGTTTGGTTCCGAGAGTTGACATT
TCAGGAGACACGGTTCGATA

Product: transposase, ISlin1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 195; Mature: 195

Protein sequence:

>195_residues
MNRSIGSQSFRIAKSILNKGVQVIVLNPGNLATIYQSLKKTDKEDSLKIARLIQRHPIEELPTVPIPNDEEEDNRRLCSE
HENWTKQLTQGKNRLHSLFTQAGLTQITKKHLRTKVSREASVTLLSDRYKKEAERILKVLDLVELNLKLVEEEIQEALKK
NKAYVQTIMSMPGIGMITSLAIKANSISHSLWVVR

Sequences:

>Translated_195_residues
MNRSIGSQSFRIAKSILNKGVQVIVLNPGNLATIYQSLKKTDKEDSLKIARLIQRHPIEELPTVPIPNDEEEDNRRLCSE
HENWTKQLTQGKNRLHSLFTQAGLTQITKKHLRTKVSREASVTLLSDRYKKEAERILKVLDLVELNLKLVEEEIQEALKK
NKAYVQTIMSMPGIGMITSLAIKANSISHSLWVVR
>Mature_195_residues
MNRSIGSQSFRIAKSILNKGVQVIVLNPGNLATIYQSLKKTDKEDSLKIARLIQRHPIEELPTVPIPNDEEEDNRRLCSE
HENWTKQLTQGKNRLHSLFTQAGLTQITKKHLRTKVSREASVTLLSDRYKKEAERILKVLDLVELNLKLVEEEIQEALKK
NKAYVQTIMSMPGIGMITSLAIKANSISHSLWVVR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22219; Mature: 22219

Theoretical pI: Translated: 10.35; Mature: 10.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRSIGSQSFRIAKSILNKGVQVIVLNPGNLATIYQSLKKTDKEDSLKIARLIQRHPIEE
CCCCCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCHHH
LPTVPIPNDEEEDNRRLCSEHENWTKQLTQGKNRLHSLFTQAGLTQITKKHLRTKVSREA
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SVTLLSDRYKKEAERILKVLDLVELNLKLVEEEIQEALKKNKAYVQTIMSMPGIGMITSL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
AIKANSISHSLWVVR
HHHHCCCCCCEEEEC
>Mature Secondary Structure
MNRSIGSQSFRIAKSILNKGVQVIVLNPGNLATIYQSLKKTDKEDSLKIARLIQRHPIEE
CCCCCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCHHH
LPTVPIPNDEEEDNRRLCSEHENWTKQLTQGKNRLHSLFTQAGLTQITKKHLRTKVSREA
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SVTLLSDRYKKEAERILKVLDLVELNLKLVEEEIQEALKKNKAYVQTIMSMPGIGMITSL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
AIKANSISHSLWVVR
HHHHCCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA