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The map label for this gene is 45657244

Identifier: 45657244

GI number: 45657244

Start: 1682693

End: 1683559

Strand: Reverse

Name: 45657244

Synonym: LIC11366

Alternate gene names: NA

Gene position: 1683559-1682693 (Counterclockwise)

Preceding gene: 45657263

Following gene: 45657241

Centisome position: 39.36

GC content: 39.22

Gene sequence:

>867_bases
ATGAGGGCTACCAGCAAAATTTTCGGGATCTTACTAAGTGTTTTATTTTTTTTATTTTGCCCCTATTCCATTTTAAAGGC
GCAGTCTTCTAAAATAAAAACTCATTCTGTCAAACCCGCATTGGAAATCCCCAATCCAGAAGAAGAGAACTGGGAGCTGG
GACTTAGAGCTGGTATTGGATACAAGGGAGAAGATAGATTGAATTCTTTCTTAAGAGGTTTTACAAACACATACGATCCT
GGAGTTGCCTCTAAAACGGAACTGGATCCACCCAAACAAACCACTCAAGTAGAACTTTTCATTCGTAAAAGAATCGCTTC
CGAAAGCCAGATCGGATTCATCGGAGGTTACAGAGAGTGGCAGAAATTCGGTTTAAAACAATTCTCTTCGGAGCCTTTTT
ATACAGATTTAAAATTTAAAATTTCCAATCCTTATGCACTTCTCATGTATTGGCACGAATGGAATTACAAACGCTGGATT
TTTCAAGGTGGATTAGGAGCCGGAATGTCTCAAGTATATTGGGACTCAGAAGGTTACGCAACTTCCGGCAAAGAAACCTT
TCGTCAAGAAGGTTTACTCAGCGGCACCGGTATAGAATTCCGTTTAGAAGGTGCGGTCAGCAGAAGAATTACAGAATCTG
CAAGTATTCAATTGGGAATCGCATTTTCCTGGATTAATATTCCTTCCCTATCCGGAACCTTTAACGGAGAATCTGCAAGT
TTTTATTTGAGAGAAAACGGAAGTATTACCCCTCTTACCGAATCAGACAATCAAACCTCAATGCTCGTCACAAATCAATT
TTCTCGTAAATTGGAATTTCAAGTTTTGACTACCACTCTCTTTTTTGGAATTGCCCAGAAATTTTAA

Upstream 100 bases:

>100_bases
TCCCAATCCAAAAACTGAAAAAAATGAAATTGCAACATGACCTACCTGTAGGAAAGAAAATCCGCTTTTTATAGAAGTCC
TTGCTATAAATCCTGTAATT

Downstream 100 bases:

>100_bases
ATATCATTTTTTGAATATAATATTTCTATAAAATTATTTTTTTTATTTATAAAAATTGAGAATTTCATTCCCAAATCCTT
AAAACATACAATTTTCTAAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 288; Mature: 288

Protein sequence:

>288_residues
MRATSKIFGILLSVLFFLFCPYSILKAQSSKIKTHSVKPALEIPNPEEENWELGLRAGIGYKGEDRLNSFLRGFTNTYDP
GVASKTELDPPKQTTQVELFIRKRIASESQIGFIGGYREWQKFGLKQFSSEPFYTDLKFKISNPYALLMYWHEWNYKRWI
FQGGLGAGMSQVYWDSEGYATSGKETFRQEGLLSGTGIEFRLEGAVSRRITESASIQLGIAFSWINIPSLSGTFNGESAS
FYLRENGSITPLTESDNQTSMLVTNQFSRKLEFQVLTTTLFFGIAQKF

Sequences:

>Translated_288_residues
MRATSKIFGILLSVLFFLFCPYSILKAQSSKIKTHSVKPALEIPNPEEENWELGLRAGIGYKGEDRLNSFLRGFTNTYDP
GVASKTELDPPKQTTQVELFIRKRIASESQIGFIGGYREWQKFGLKQFSSEPFYTDLKFKISNPYALLMYWHEWNYKRWI
FQGGLGAGMSQVYWDSEGYATSGKETFRQEGLLSGTGIEFRLEGAVSRRITESASIQLGIAFSWINIPSLSGTFNGESAS
FYLRENGSITPLTESDNQTSMLVTNQFSRKLEFQVLTTTLFFGIAQKF
>Mature_288_residues
MRATSKIFGILLSVLFFLFCPYSILKAQSSKIKTHSVKPALEIPNPEEENWELGLRAGIGYKGEDRLNSFLRGFTNTYDP
GVASKTELDPPKQTTQVELFIRKRIASESQIGFIGGYREWQKFGLKQFSSEPFYTDLKFKISNPYALLMYWHEWNYKRWI
FQGGLGAGMSQVYWDSEGYATSGKETFRQEGLLSGTGIEFRLEGAVSRRITESASIQLGIAFSWINIPSLSGTFNGESAS
FYLRENGSITPLTESDNQTSMLVTNQFSRKLEFQVLTTTLFFGIAQKF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32668; Mature: 32668

Theoretical pI: Translated: 9.13; Mature: 9.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRATSKIFGILLSVLFFLFCPYSILKAQSSKIKTHSVKPALEIPNPEEENWELGLRAGIG
CCCHHHHHHHHHHHHHHHHCCHHHHHHCCCCCEECCCCCEEECCCCCCCCCEEEEEECCC
YKGEDRLNSFLRGFTNTYDPGVASKTELDPPKQTTQVELFIRKRIASESQIGFIGGYREW
CCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCHHHH
QKFGLKQFSSEPFYTDLKFKISNPYALLMYWHEWNYKRWIFQGGLGAGMSQVYWDSEGYA
HHHHHHHHCCCCCEEEEEEEECCCEEEEEEEEECCEEEEEEECCCCCCCHHEEECCCCCC
TSGKETFRQEGLLSGTGIEFRLEGAVSRRITESASIQLGIAFSWINIPSLSGTFNGESAS
CCCHHHHHHCCCCCCCCEEEEECCHHHHHHHCCCEEEEEEEEEEEECCCCCCCCCCCCEE
FYLRENGSITPLTESDNQTSMLVTNQFSRKLEFQVLTTTLFFGIAQKF
EEEECCCCCCCCCCCCCCEEEEEEEHHCHHEEHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRATSKIFGILLSVLFFLFCPYSILKAQSSKIKTHSVKPALEIPNPEEENWELGLRAGIG
CCCHHHHHHHHHHHHHHHHCCHHHHHHCCCCCEECCCCCEEECCCCCCCCCEEEEEECCC
YKGEDRLNSFLRGFTNTYDPGVASKTELDPPKQTTQVELFIRKRIASESQIGFIGGYREW
CCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCHHHH
QKFGLKQFSSEPFYTDLKFKISNPYALLMYWHEWNYKRWIFQGGLGAGMSQVYWDSEGYA
HHHHHHHHCCCCCEEEEEEEECCCEEEEEEEEECCEEEEEEECCCCCCCHHEEECCCCCC
TSGKETFRQEGLLSGTGIEFRLEGAVSRRITESASIQLGIAFSWINIPSLSGTFNGESAS
CCCHHHHHHCCCCCCCCEEEEECCHHHHHHHCCCEEEEEEEEEEEECCCCCCCCCCCCEE
FYLRENGSITPLTESDNQTSMLVTNQFSRKLEFQVLTTTLFFGIAQKF
EEEECCCCCCCCCCCCCCEEEEEEEHHCHHEEHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA