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The map label for this gene is 45657238

Identifier: 45657238

GI number: 45657238

Start: 1675783

End: 1676421

Strand: Reverse

Name: 45657238

Synonym: LIC11360

Alternate gene names: NA

Gene position: 1676421-1675783 (Counterclockwise)

Preceding gene: 45657240

Following gene: 45657237

Centisome position: 39.19

GC content: 32.39

Gene sequence:

>639_bases
TTGTTAAGTTGTAAAACACGAAAACCTATGTCGACCTCTACCATTTCTTTTTATGGATTTTTGATTTTTTTGTTAAGCGG
GTGTTCTCCTATAAAAGCAGAACTTCCTTACTTTTCCCCTAACTTAGAATGTTCTAAAGAAGAGATTCCACTTTTTATTC
AACCCGCTCAAGATGTTGAAACTGGAAACCGTTTGGAGATGATTTATTGTAGTAAAACGGAAACTATTTCAGAAAAAAAA
ATTGAACTGAGTCTTGTTTTTCAAGACGAAAGACATCCATCGATTTGGAAAGATAAGGTCTATCGGATTTATAGAGGTTT
TAAATATGGAAGACATAAGGATATTGAAACACTTCTTCTCGAGTTTTCAAAAAAAGGAGAACTACTCAATATTCATCTCA
AAAACGTTTACTCAGGAGAACAAAGATTTGCAGCAGATCCGGTACATCATTTTGATTCCATTTTAAAATCAGAACAAATC
ATGAGAGATGAAGGGAAACCAGTTTTATTTATTAACACTTGGAATCATATGTTTTCAGAAACGAACATGAACCCAGAACT
TTCCGAAAAAAAATTAAATTCTATTGAACTTCGAACCGGAAGCAGAGAAAAATTAGATTCCTTCTATTTGGAAAAATAA

Upstream 100 bases:

>100_bases
TGAACTCTTAGTTTCGAATTCAATCTCAACAGTTAAAAAATAAAATTGAATCCTTTTTAATAATTAATCGATAAGATTTC
TTTTCAAGTTTGACTACAAA

Downstream 100 bases:

>100_bases
GATTAGCTTTTCCAAATTCCTTCAACTGAACTAAATTCAGTAAATGCCTCTAGTCAACATTCTGGTTCTCATCTTTGTTA
CACAAAGAGCACGCTCTTTT

Product: putative lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 212; Mature: 212

Protein sequence:

>212_residues
MLSCKTRKPMSTSTISFYGFLIFLLSGCSPIKAELPYFSPNLECSKEEIPLFIQPAQDVETGNRLEMIYCSKTETISEKK
IELSLVFQDERHPSIWKDKVYRIYRGFKYGRHKDIETLLLEFSKKGELLNIHLKNVYSGEQRFAADPVHHFDSILKSEQI
MRDEGKPVLFINTWNHMFSETNMNPELSEKKLNSIELRTGSREKLDSFYLEK

Sequences:

>Translated_212_residues
MLSCKTRKPMSTSTISFYGFLIFLLSGCSPIKAELPYFSPNLECSKEEIPLFIQPAQDVETGNRLEMIYCSKTETISEKK
IELSLVFQDERHPSIWKDKVYRIYRGFKYGRHKDIETLLLEFSKKGELLNIHLKNVYSGEQRFAADPVHHFDSILKSEQI
MRDEGKPVLFINTWNHMFSETNMNPELSEKKLNSIELRTGSREKLDSFYLEK
>Mature_212_residues
MLSCKTRKPMSTSTISFYGFLIFLLSGCSPIKAELPYFSPNLECSKEEIPLFIQPAQDVETGNRLEMIYCSKTETISEKK
IELSLVFQDERHPSIWKDKVYRIYRGFKYGRHKDIETLLLEFSKKGELLNIHLKNVYSGEQRFAADPVHHFDSILKSEQI
MRDEGKPVLFINTWNHMFSETNMNPELSEKKLNSIELRTGSREKLDSFYLEK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24803; Mature: 24803

Theoretical pI: Translated: 7.54; Mature: 7.54

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSCKTRKPMSTSTISFYGFLIFLLSGCSPIKAELPYFSPNLECSKEEIPLFIQPAQDVE
CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCC
TGNRLEMIYCSKTETISEKKIELSLVFQDERHPSIWKDKVYRIYRGFKYGRHKDIETLLL
CCCEEEEEEECCCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHH
EFSKKGELLNIHLKNVYSGEQRFAADPVHHFDSILKSEQIMRDEGKPVLFINTWNHMFSE
HHHCCCCEEEEEECCCCCCCHHHCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHC
TNMNPELSEKKLNSIELRTGSREKLDSFYLEK
CCCCCCHHHHCCCEEEECCCCHHHHHHHHCCC
>Mature Secondary Structure
MLSCKTRKPMSTSTISFYGFLIFLLSGCSPIKAELPYFSPNLECSKEEIPLFIQPAQDVE
CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCC
TGNRLEMIYCSKTETISEKKIELSLVFQDERHPSIWKDKVYRIYRGFKYGRHKDIETLLL
CCCEEEEEEECCCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHH
EFSKKGELLNIHLKNVYSGEQRFAADPVHHFDSILKSEQIMRDEGKPVLFINTWNHMFSE
HHHCCCCEEEEEECCCCCCCHHHCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHC
TNMNPELSEKKLNSIELRTGSREKLDSFYLEK
CCCCCCHHHHCCCEEEECCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA