Click here to switch to the map view.

The map label for this gene is 45657215

Identifier: 45657215

GI number: 45657215

Start: 1649307

End: 1649513

Strand: Reverse

Name: 45657215

Synonym: LIC11337

Alternate gene names: NA

Gene position: 1649513-1649307 (Counterclockwise)

Preceding gene: 45657216

Following gene: 45657214

Centisome position: 38.57

GC content: 34.78

Gene sequence:

>207_bases
TTGGGTCGGAACCCCGCCCATTTTTGGAAGTTAGGTAGAACTTGTGAAACCAGAACACAAAAACCTTCTAAAAAAGTAGT
TCCCACATTTTTAAAATTACTTTTAAAGCCCCAGATTCGTTGGTGTTACTATCCCTATAAATTAAGTACTGCAAATTTTT
ATTGTAAAGCCACGTTTCTGCATCAAATATTGAGAAACTCTTGTTAA

Upstream 100 bases:

>100_bases
AGAATGCATCCAAAAGCTAAAAGTGAACAGCTCCACATTTTTATCGTAATCTTACTTTCCTCAAAATCTGATTCAAAATG
AAGCTTGTTTTTAATTTACT

Downstream 100 bases:

>100_bases
TAGAGTCTCTCAATAACAATCGTATTCTTTAAAAAACGAAACTTTTATTAACATGAGTCCGGCATAAGAAAATCAGAAAG
AATTCTCTAAAAGTATGAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 68; Mature: 67

Protein sequence:

>68_residues
MGRNPAHFWKLGRTCETRTQKPSKKVVPTFLKLLLKPQIRWCYYPYKLSTANFYCKATFLHQILRNSC

Sequences:

>Translated_68_residues
MGRNPAHFWKLGRTCETRTQKPSKKVVPTFLKLLLKPQIRWCYYPYKLSTANFYCKATFLHQILRNSC
>Mature_67_residues
GRNPAHFWKLGRTCETRTQKPSKKVVPTFLKLLLKPQIRWCYYPYKLSTANFYCKATFLHQILRNSC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8123; Mature: 7992

Theoretical pI: Translated: 10.73; Mature: 10.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.9 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
7.4 %Cys+Met (Translated Protein)
6.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRNPAHFWKLGRTCETRTQKPSKKVVPTFLKLLLKPQIRWCYYPYKLSTANFYCKATFL
CCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEECCEEECCCCHHHHHHHH
HQILRNSC
HHHHHCCC
>Mature Secondary Structure 
GRNPAHFWKLGRTCETRTQKPSKKVVPTFLKLLLKPQIRWCYYPYKLSTANFYCKATFL
CCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEECCEEECCCCHHHHHHHH
HQILRNSC
HHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA