| Definition | Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_005823 |
| Length | 4,277,185 |
Click here to switch to the map view.
The map label for this gene is sbp
Identifier: 45657150
GI number: 45657150
Start: 1565101
End: 1566105
Strand: Reverse
Name: sbp
Synonym: LIC11267
Alternate gene names: 45657150
Gene position: 1566105-1565101 (Counterclockwise)
Preceding gene: 45657151
Following gene: 45657148
Centisome position: 36.62
GC content: 37.91
Gene sequence:
>1005_bases ATGAAAATAAAATTTTTTAAAATTACCACCATCGTGTTTTTTACAATGACCTCGAACCTAGGGCTCTTTGCAAAAGATAT AACTCTACTTAACGTATCTTATGATCCAACAAGAGAACTATACGCCGAATACAACAAACTTTTTGCAAGTTATTGGAAAT CTAAAACTGGAGACGAAGTAAGAGTCAATCAATCCCACGGAGGAAGTGGAAAACAGGCACGATCTGTGATCGACGGTTTA GAAGCTGATATTGTTACTCTTGCACTCGCATACGATATAGATATCATCGCGTCCAAAGGTTTAATTTCTAGGGATTGGCT AAAAAGTCTTCCAAACAACAGTACTCCTTATACTTCTACCATCGTGTTTGTAGTTAGAAAAGGTAATCCTAAAAATATAA AAGACTGGGACGACCTAGTTAAATCAAAAGTAAGTGTAATTACTCCAAATCCTAAAACAAGTGGAGGAGCCAGATGGAAC TATCTCGCTGCTTGGGCCTTTGCACAAAAAAAGTTCAACAACGATACAAATAAAGTTCAAGACTTTATAAAAACATTATA TAAGAATGTTCCAGTTTTAGATTCAGGGGCTAGAGGTTCTAGCAATACTTTTGCACAAAACGGAATCGGAGACGTCTTGA TCGCTTGGGAAAACGAATCCTTCCTCATTCTAGAAGAATTTGGTAAGGACAAATATGAAGTAGTCATTCCATCTTTGAGC ATTCTCGCCGAACCACCCGTAGCAATCGTGGAAAAAAATGCGGATAAACACGGAAATTTAGAAACTGCAAAAGCCTATCT CAAATCCCTCTACTCCGAGGCGGCGCAAGAAATTATTGCTAAACATGGTTATCGCCCTAGAAGCCAAACCATACTTAAAA AATATGAGACTAAATTCCCAAAACTAGATCTAATCACAGTAGACGGACATTTCAACGGTTGGCAAAAAGCACATAAAGAC CATTTTGCTGACGGCGCTTCTTTCGATCAGCTCTATGTCAAATAA
Upstream 100 bases:
>100_bases AACATAAACGACAGATATACACTGGACAATAGAGCCTATAGTTTTTTTCTGTTCGTTCAATTTGCAATGTAATTCATAAA ATTGGAATTAGGAAATCAGC
Downstream 100 bases:
>100_bases AATAGATATACTCTTTTTAAATGAAAAATAAAACTATATCTTTTTTCCATTATTCAATGTCATATAATAGGTTATATAAA TTTCTCTTAGAAAAGCGTAC
Product: periplasmic sulfate-binding protein
Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]
Alternate protein names: Sulfate starvation-induced protein 2; SSI2 [H]
Number of amino acids: Translated: 334; Mature: 334
Protein sequence:
>334_residues MKIKFFKITTIVFFTMTSNLGLFAKDITLLNVSYDPTRELYAEYNKLFASYWKSKTGDEVRVNQSHGGSGKQARSVIDGL EADIVTLALAYDIDIIASKGLISRDWLKSLPNNSTPYTSTIVFVVRKGNPKNIKDWDDLVKSKVSVITPNPKTSGGARWN YLAAWAFAQKKFNNDTNKVQDFIKTLYKNVPVLDSGARGSSNTFAQNGIGDVLIAWENESFLILEEFGKDKYEVVIPSLS ILAEPPVAIVEKNADKHGNLETAKAYLKSLYSEAAQEIIAKHGYRPRSQTILKKYETKFPKLDLITVDGHFNGWQKAHKD HFADGASFDQLYVK
Sequences:
>Translated_334_residues MKIKFFKITTIVFFTMTSNLGLFAKDITLLNVSYDPTRELYAEYNKLFASYWKSKTGDEVRVNQSHGGSGKQARSVIDGL EADIVTLALAYDIDIIASKGLISRDWLKSLPNNSTPYTSTIVFVVRKGNPKNIKDWDDLVKSKVSVITPNPKTSGGARWN YLAAWAFAQKKFNNDTNKVQDFIKTLYKNVPVLDSGARGSSNTFAQNGIGDVLIAWENESFLILEEFGKDKYEVVIPSLS ILAEPPVAIVEKNADKHGNLETAKAYLKSLYSEAAQEIIAKHGYRPRSQTILKKYETKFPKLDLITVDGHFNGWQKAHKD HFADGASFDQLYVK >Mature_334_residues MKIKFFKITTIVFFTMTSNLGLFAKDITLLNVSYDPTRELYAEYNKLFASYWKSKTGDEVRVNQSHGGSGKQARSVIDGL EADIVTLALAYDIDIIASKGLISRDWLKSLPNNSTPYTSTIVFVVRKGNPKNIKDWDDLVKSKVSVITPNPKTSGGARWN YLAAWAFAQKKFNNDTNKVQDFIKTLYKNVPVLDSGARGSSNTFAQNGIGDVLIAWENESFLILEEFGKDKYEVVIPSLS ILAEPPVAIVEKNADKHGNLETAKAYLKSLYSEAAQEIIAKHGYRPRSQTILKKYETKFPKLDLITVDGHFNGWQKAHKD HFADGASFDQLYVK
Specific function: This protein specifically binds sulfate and is involved in its transmembrane transport [H]
COG id: COG1613
COG function: function code P; ABC-type sulfate transport system, periplasmic component
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the prokaryotic sulfate-binding protein family [H]
Homologues:
Organism=Escherichia coli, GI1790351, Length=310, Percent_Identity=66.1290322580645, Blast_Score=437, Evalue=1e-124, Organism=Escherichia coli, GI1788765, Length=305, Percent_Identity=48.1967213114754, Blast_Score=285, Evalue=3e-78,
Paralogues:
None
Copy number: 1240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006059 - InterPro: IPR000957 - InterPro: IPR005669 [H]
Pfam domain/function: PF01547 SBP_bac_1 [H]
EC number: NA
Molecular weight: Translated: 37479; Mature: 37479
Theoretical pI: Translated: 9.66; Mature: 9.66
Prosite motif: PS00401 PROK_SULFATE_BIND_1 ; PS00757 PROK_SULFATE_BIND_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIKFFKITTIVFFTMTSNLGLFAKDITLLNVSYDPTRELYAEYNKLFASYWKSKTGDEV CEEEEEEEEEEEEEEHHCCCCEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCEE RVNQSHGGSGKQARSVIDGLEADIVTLALAYDIDIIASKGLISRDWLKSLPNNSTPYTST EEECCCCCCCHHHHHHHHCCHHHHHHHHHHHHHEEEECCCCCCHHHHHHCCCCCCCCEEE IVFVVRKGNPKNIKDWDDLVKSKVSVITPNPKTSGGARWNYLAAWAFAQKKFNNDTNKVQ EEEEEECCCCCCCCHHHHHHHCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHH DFIKTLYKNVPVLDSGARGSSNTFAQNGIGDVLIAWENESFLILEEFGKDKYEVVIPSLS HHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCEEEEECCCCEEEEHHCCCCCEEEEECCHH ILAEPPVAIVEKNADKHGNLETAKAYLKSLYSEAAQEIIAKHGYRPRSQTILKKYETKFP HHCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCC KLDLITVDGHFNGWQKAHKDHFADGASFDQLYVK CEEEEEECCCCCCHHHHHHHHCCCCCCCCCEEEC >Mature Secondary Structure MKIKFFKITTIVFFTMTSNLGLFAKDITLLNVSYDPTRELYAEYNKLFASYWKSKTGDEV CEEEEEEEEEEEEEEHHCCCCEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCEE RVNQSHGGSGKQARSVIDGLEADIVTLALAYDIDIIASKGLISRDWLKSLPNNSTPYTST EEECCCCCCCHHHHHHHHCCHHHHHHHHHHHHHEEEECCCCCCHHHHHHCCCCCCCCEEE IVFVVRKGNPKNIKDWDDLVKSKVSVITPNPKTSGGARWNYLAAWAFAQKKFNNDTNKVQ EEEEEECCCCCCCCHHHHHHHCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHH DFIKTLYKNVPVLDSGARGSSNTFAQNGIGDVLIAWENESFLILEEFGKDKYEVVIPSLS HHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCEEEEECCCCEEEEHHCCCCCEEEEECCHH ILAEPPVAIVEKNADKHGNLETAKAYLKSLYSEAAQEIIAKHGYRPRSQTILKKYETKFP HHCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCC KLDLITVDGHFNGWQKAHKDHFADGASFDQLYVK CEEEEEECCCCCCHHHHHHHHCCCCCCCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]
Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3158524; 2002055; 8346018; 9278503; 9298646; 8774726 [H]