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The map label for this gene is 45657147

Identifier: 45657147

GI number: 45657147

Start: 1562177

End: 1562920

Strand: Reverse

Name: 45657147

Synonym: LIC11264

Alternate gene names: NA

Gene position: 1562920-1562177 (Counterclockwise)

Preceding gene: 45657148

Following gene: 45657140

Centisome position: 36.54

GC content: 36.42

Gene sequence:

>744_bases
ATGAAATTCAGATTTCAAAAACTTGGATCTATTTTCGTCTGTATTTTTTACAATTTGTTTTTTTCTTTTGTTTCACTCGA
AGCAATTACAATCGAAGTTTTTATTCCTTTATGCGACGGTAAATCGTTAGTATGTGGAAAAGGGAAAGCGGGAGATCCTC
GTTCGTTAGAGGAAAATCTATACTGGGGTGCCGCCTTCGGCGCTGAGACTTTTTTTAAAAGAAATTCCAATTTTAAAATT
CTAGAAATCAAAGAAAGAAAGTCAGATTCTCCCATTTTAAGAACTCTCATAATTGAAAAAAAAAGAAAACAAAACGAAAC
ATATACGAAACTTATCATCTATGCCTACGCAGGAGATAAAATAGATAACGCGCTTTTAGACTTTTTAAACGCTTCCTCCG
GAAAATCTCCTGCCGATATTATCGTCTGGTCCGGTCACAATCGGTTAATGGATCGTATTTCACCAAAGCTACAATCTCAA
TCCGCTAAAACCGTAGCCGTCCTTGCCTGCGAAAGTGAAAAATACTTTGATTCCGTTTTACGTTCAATCGGCGCAAAACC
AATCGTTTTGACAAAAACTTTTATGGCTCCAGAAGCCTATCTTTTAGAAGCGTTAACCGAAACCGTATCTAAATTTGGGG
CTGAGGATAAAAAATCGATCCGATCCGCTATGATTCGTTCATACGCAAAGTATCAAAAAATTTCTTTAAAAGCGGCAGGA
AGTGTCTTTTCTAAATTAGAATAG

Upstream 100 bases:

>100_bases
TTTCGATTGAATTTGTTTCATTCTTGATTTTCGAATTATCTACCATGATAAAAAATATTCACAATTTGAATTGACTTTTT
AATTTTGGGCTAATTGCAAT

Downstream 100 bases:

>100_bases
AGCTTGGAAACTCTATGGTATTTTGGTTTTAATAAAAAGTAAGATTTAGAAACTCTAAGAAATCTGAACATAAAATATCG
AGATCAGATACAAATATCAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 247; Mature: 247

Protein sequence:

>247_residues
MKFRFQKLGSIFVCIFYNLFFSFVSLEAITIEVFIPLCDGKSLVCGKGKAGDPRSLEENLYWGAAFGAETFFKRNSNFKI
LEIKERKSDSPILRTLIIEKKRKQNETYTKLIIYAYAGDKIDNALLDFLNASSGKSPADIIVWSGHNRLMDRISPKLQSQ
SAKTVAVLACESEKYFDSVLRSIGAKPIVLTKTFMAPEAYLLEALTETVSKFGAEDKKSIRSAMIRSYAKYQKISLKAAG
SVFSKLE

Sequences:

>Translated_247_residues
MKFRFQKLGSIFVCIFYNLFFSFVSLEAITIEVFIPLCDGKSLVCGKGKAGDPRSLEENLYWGAAFGAETFFKRNSNFKI
LEIKERKSDSPILRTLIIEKKRKQNETYTKLIIYAYAGDKIDNALLDFLNASSGKSPADIIVWSGHNRLMDRISPKLQSQ
SAKTVAVLACESEKYFDSVLRSIGAKPIVLTKTFMAPEAYLLEALTETVSKFGAEDKKSIRSAMIRSYAKYQKISLKAAG
SVFSKLE
>Mature_247_residues
MKFRFQKLGSIFVCIFYNLFFSFVSLEAITIEVFIPLCDGKSLVCGKGKAGDPRSLEENLYWGAAFGAETFFKRNSNFKI
LEIKERKSDSPILRTLIIEKKRKQNETYTKLIIYAYAGDKIDNALLDFLNASSGKSPADIIVWSGHNRLMDRISPKLQSQ
SAKTVAVLACESEKYFDSVLRSIGAKPIVLTKTFMAPEAYLLEALTETVSKFGAEDKKSIRSAMIRSYAKYQKISLKAAG
SVFSKLE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27741; Mature: 27741

Theoretical pI: Translated: 9.96; Mature: 9.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFRFQKLGSIFVCIFYNLFFSFVSLEAITIEVFIPLCDGKSLVCGKGKAGDPRSLEENL
CCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCCCEEEECCCCCCCCCCHHHCC
YWGAAFGAETFFKRNSNFKILEIKERKSDSPILRTLIIEKKRKQNETYTKLIIYAYAGDK
EEEEHHCHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEEECCCC
IDNALLDFLNASSGKSPADIIVWSGHNRLMDRISPKLQSQSAKTVAVLACESEKYFDSVL
HHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHCHHHHCCCCCEEEEEEECCHHHHHHHH
RSIGAKPIVLTKTFMAPEAYLLEALTETVSKFGAEDKKSIRSAMIRSYAKYQKISLKAAG
HHHCCCCEEEEEHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
SVFSKLE
HHHHHCC
>Mature Secondary Structure
MKFRFQKLGSIFVCIFYNLFFSFVSLEAITIEVFIPLCDGKSLVCGKGKAGDPRSLEENL
CCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCCCEEEECCCCCCCCCCHHHCC
YWGAAFGAETFFKRNSNFKILEIKERKSDSPILRTLIIEKKRKQNETYTKLIIYAYAGDK
EEEEHHCHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEEECCCC
IDNALLDFLNASSGKSPADIIVWSGHNRLMDRISPKLQSQSAKTVAVLACESEKYFDSVL
HHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHCHHHHCCCCCEEEEEEECCHHHHHHHH
RSIGAKPIVLTKTFMAPEAYLLEALTETVSKFGAEDKKSIRSAMIRSYAKYQKISLKAAG
HHHCCCCEEEEEHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
SVFSKLE
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA