Click here to switch to the map view.

The map label for this gene is 45657109

Identifier: 45657109

GI number: 45657109

Start: 1515532

End: 1515972

Strand: Reverse

Name: 45657109

Synonym: LIC11226

Alternate gene names: NA

Gene position: 1515972-1515532 (Counterclockwise)

Preceding gene: 45657110

Following gene: 45657108

Centisome position: 35.44

GC content: 39.0

Gene sequence:

>441_bases
ATGCACCCCGAATTACATATCAATTACTTGGCGGTATTGGTGGCAGTAATTACAAATTTTATCTTCGGTTCTGTTTGGTA
CGGCCCTTTACTTGGAAAAACATGGGCGAAGGAAATGGGACTTCCTTCTAATTTTCAACCAAATCAAAAAGAAATGTTTA
GATCAATGGGACTGATGATCATCGGTTCTATTCTTACTGCTTACGTTTTATTTTATACTACAAACGTTTGGAGAGCTTCT
TCCTGGAAGGCTGGGGAAGATCAAGCGGATTGGGTCTACGGATTTTATTCTGGAATTTATACTTGGCTCGGCTTTTATGT
TCCTTTGCTTCTCAACAGCGTCGCCTTCGAAAATAAATCCTGGAAACTCTTTGCAATCAACGCAGGTTATAATTTAATCT
CCCTCCAAGTAGTAGCAATGATTCTTTCGTATTGGAGATAA

Upstream 100 bases:

>100_bases
ACTCTAAAATTTCCAGACTTAGCAACTTTTTATAGAATTACTTGACATCCATTCTGATTTTGTCATATATTTTTTCTCAA
AAAAAATAGGAGCTTTTATT

Downstream 100 bases:

>100_bases
ATAGGAAATCAAAATCCATAATGTTTTTTTAACGTTATACATAACTTTTAAATATTAAGAAAAACTTAGGTTTCATTCTC
TAATTAGAGTTTTATTGGCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 146; Mature: 146

Protein sequence:

>146_residues
MHPELHINYLAVLVAVITNFIFGSVWYGPLLGKTWAKEMGLPSNFQPNQKEMFRSMGLMIIGSILTAYVLFYTTNVWRAS
SWKAGEDQADWVYGFYSGIYTWLGFYVPLLLNSVAFENKSWKLFAINAGYNLISLQVVAMILSYWR

Sequences:

>Translated_146_residues
MHPELHINYLAVLVAVITNFIFGSVWYGPLLGKTWAKEMGLPSNFQPNQKEMFRSMGLMIIGSILTAYVLFYTTNVWRAS
SWKAGEDQADWVYGFYSGIYTWLGFYVPLLLNSVAFENKSWKLFAINAGYNLISLQVVAMILSYWR
>Mature_146_residues
MHPELHINYLAVLVAVITNFIFGSVWYGPLLGKTWAKEMGLPSNFQPNQKEMFRSMGLMIIGSILTAYVLFYTTNVWRAS
SWKAGEDQADWVYGFYSGIYTWLGFYVPLLLNSVAFENKSWKLFAINAGYNLISLQVVAMILSYWR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16784; Mature: 16784

Theoretical pI: Translated: 9.18; Mature: 9.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHPELHINYLAVLVAVITNFIFGSVWYGPLLGKTWAKEMGLPSNFQPNQKEMFRSMGLMI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH
IGSILTAYVLFYTTNVWRASSWKAGEDQADWVYGFYSGIYTWLGFYVPLLLNSVAFENKS
HHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
WKLFAINAGYNLISLQVVAMILSYWR
EEEEEEECCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MHPELHINYLAVLVAVITNFIFGSVWYGPLLGKTWAKEMGLPSNFQPNQKEMFRSMGLMI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH
IGSILTAYVLFYTTNVWRASSWKAGEDQADWVYGFYSGIYTWLGFYVPLLLNSVAFENKS
HHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
WKLFAINAGYNLISLQVVAMILSYWR
EEEEEEECCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA