Click here to switch to the map view.

The map label for this gene is 45657067

Identifier: 45657067

GI number: 45657067

Start: 1455096

End: 1456142

Strand: Reverse

Name: 45657067

Synonym: LIC11183

Alternate gene names: NA

Gene position: 1456142-1455096 (Counterclockwise)

Preceding gene: 45657074

Following gene: 45657062

Centisome position: 34.04

GC content: 33.24

Gene sequence:

>1047_bases
TTGAGTTGTTTATCAAAGAGTTATGAGGAAAAATTAAGAATGAAAATACTTAAATGGATTTTGGGAATCATCGGAACATT
CGCTCTATTTTTAGTCGTCACCTTTTATGCTGAAACTCCTAAATATGAATACAAATCTGTTCCCTTATATTCAAACTTCG
ACAGTTATTATCGGGAAAAACTTCAAATCAGTCGATCTAAAAAAGTAAGACCTGGCAACGAAGAAAAATTAGTGAGATAT
TCTGCGGATAAAACCGATTTCTCAATCCTTTATATCCACGGCTTTGGAGCATCTCGCGCAGAAGGAGAAGAAGTTACAGA
TCAACTCGCAAAAGATTTCAAAGCAAATCTCTACTATGTTCGTCTTCCCGGTCATGGAACTAATTTAGAAAATCATAGAG
ATACAACTTTTGAAGAAATTTTACAGGACTCTGAAACGGCTTTTTTAGAATGCGAAAAACTAGGTAAAAAAACGATTCTA
ATCGGAACTAGTATGGGAGGGTTGATTTCTACATACCTAGCAGCCAAATATCCTGAAAAAGTTCACGCTTTAGTTCTTGT
TTCCCCTTTTTACGATTTTACAAATCCATTTAGTGTTATTTATCAATTTTCTTGGGGTAAAGATTTTGCTAATATAGTAA
TGGGAAAAATTCGTAAATCTACAGAAGAAGAAAAACGAAATCCAGCCAGCGCTTTCTGGTATAGAGATCAATATCTCGCA
GCGGTTCAAAATTTATCAGACTTAAGAGAGTTCATCTTGGGAACTGATCCATTTTCCAAAATTTCCTCTCCTACTTTATT
GTTCTACTATTATAAAAACGAAAAAAATCAAGATGTGTCCGCTTCCGTCTCATCTATGTTAAACGCATTCAAAAAAGTAA
ATGAAAACGGAAAGGCAAACCCATTGAACAAAGCGGTAAAAGTAGAATTTGGAAATCACGTATTATTTTCCAAATACATG
AAAAGTGATAAAGACCTGATTTTAAAAGAAACAGAAACTTTCATCCAAAATGTATTTTCTTTAAATAAAAATTTATCCCA
CAATTGA

Upstream 100 bases:

>100_bases
ATAGTGATAAAAATCTCGATTCCTTAACACAGATACAGTTTTAGTCAATACTCTTTGTTTTCAAGCTGCACTTTTTTCTT
GCAGCAACGAGATAGATGAT

Downstream 100 bases:

>100_bases
TACCTTATCAACTTGTGTATCTGTAAATGTTGTGATAAAGCGTAGAGGAACTCAGTAGAGCGCGTTCTATATTCAGATTT
TGTCCCAAATCCTTAACACC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 348; Mature: 347

Protein sequence:

>348_residues
MSCLSKSYEEKLRMKILKWILGIIGTFALFLVVTFYAETPKYEYKSVPLYSNFDSYYREKLQISRSKKVRPGNEEKLVRY
SADKTDFSILYIHGFGASRAEGEEVTDQLAKDFKANLYYVRLPGHGTNLENHRDTTFEEILQDSETAFLECEKLGKKTIL
IGTSMGGLISTYLAAKYPEKVHALVLVSPFYDFTNPFSVIYQFSWGKDFANIVMGKIRKSTEEEKRNPASAFWYRDQYLA
AVQNLSDLREFILGTDPFSKISSPTLLFYYYKNEKNQDVSASVSSMLNAFKKVNENGKANPLNKAVKVEFGNHVLFSKYM
KSDKDLILKETETFIQNVFSLNKNLSHN

Sequences:

>Translated_348_residues
MSCLSKSYEEKLRMKILKWILGIIGTFALFLVVTFYAETPKYEYKSVPLYSNFDSYYREKLQISRSKKVRPGNEEKLVRY
SADKTDFSILYIHGFGASRAEGEEVTDQLAKDFKANLYYVRLPGHGTNLENHRDTTFEEILQDSETAFLECEKLGKKTIL
IGTSMGGLISTYLAAKYPEKVHALVLVSPFYDFTNPFSVIYQFSWGKDFANIVMGKIRKSTEEEKRNPASAFWYRDQYLA
AVQNLSDLREFILGTDPFSKISSPTLLFYYYKNEKNQDVSASVSSMLNAFKKVNENGKANPLNKAVKVEFGNHVLFSKYM
KSDKDLILKETETFIQNVFSLNKNLSHN
>Mature_347_residues
SCLSKSYEEKLRMKILKWILGIIGTFALFLVVTFYAETPKYEYKSVPLYSNFDSYYREKLQISRSKKVRPGNEEKLVRYS
ADKTDFSILYIHGFGASRAEGEEVTDQLAKDFKANLYYVRLPGHGTNLENHRDTTFEEILQDSETAFLECEKLGKKTILI
GTSMGGLISTYLAAKYPEKVHALVLVSPFYDFTNPFSVIYQFSWGKDFANIVMGKIRKSTEEEKRNPASAFWYRDQYLAA
VQNLSDLREFILGTDPFSKISSPTLLFYYYKNEKNQDVSASVSSMLNAFKKVNENGKANPLNKAVKVEFGNHVLFSKYMK
SDKDLILKETETFIQNVFSLNKNLSHN

Specific function: Unknown

COG id: COG0596

COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40029; Mature: 39898

Theoretical pI: Translated: 9.24; Mature: 9.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSCLSKSYEEKLRMKILKWILGIIGTFALFLVVTFYAETPKYEYKSVPLYSNFDSYYREK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHH
LQISRSKKVRPGNEEKLVRYSADKTDFSILYIHGFGASRAEGEEVTDQLAKDFKANLYYV
HHHHHCCCCCCCCHHHEEEEECCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCEEEE
RLPGHGTNLENHRDTTFEEILQDSETAFLECEKLGKKTILIGTSMGGLISTYLAAKYPEK
EECCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHCCCEEEEEECCHHHHHHHHHHHCCCCH
VHALVLVSPFYDFTNPFSVIYQFSWGKDFANIVMGKIRKSTEEEKRNPASAFWYRDQYLA
HEEEEEEECCCCCCCCHHEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
AVQNLSDLREFILGTDPFSKISSPTLLFYYYKNEKNQDVSASVSSMLNAFKKVNENGKAN
HHHHHHHHHHHHCCCCCHHHCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCC
PLNKAVKVEFGNHVLFSKYMKSDKDLILKETETFIQNVFSLNKNLSHN
CCCCEEEEEECCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SCLSKSYEEKLRMKILKWILGIIGTFALFLVVTFYAETPKYEYKSVPLYSNFDSYYREK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHH
LQISRSKKVRPGNEEKLVRYSADKTDFSILYIHGFGASRAEGEEVTDQLAKDFKANLYYV
HHHHHCCCCCCCCHHHEEEEECCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCEEEE
RLPGHGTNLENHRDTTFEEILQDSETAFLECEKLGKKTILIGTSMGGLISTYLAAKYPEK
EECCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHCCCEEEEEECCHHHHHHHHHHHCCCCH
VHALVLVSPFYDFTNPFSVIYQFSWGKDFANIVMGKIRKSTEEEKRNPASAFWYRDQYLA
HEEEEEEECCCCCCCCHHEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
AVQNLSDLREFILGTDPFSKISSPTLLFYYYKNEKNQDVSASVSSMLNAFKKVNENGKAN
HHHHHHHHHHHHCCCCCHHHCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCC
PLNKAVKVEFGNHVLFSKYMKSDKDLILKETETFIQNVFSLNKNLSHN
CCCCEEEEEECCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA