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The map label for this gene is 45656896

Identifier: 45656896

GI number: 45656896

Start: 1227933

End: 1228682

Strand: Reverse

Name: 45656896

Synonym: LIC11009

Alternate gene names: NA

Gene position: 1228682-1227933 (Counterclockwise)

Preceding gene: 45656905

Following gene: 45656894

Centisome position: 28.73

GC content: 32.93

Gene sequence:

>750_bases
ATGGAGTGTATAATGTTCAAAATTTTAAAAAGAATGAGTGTTTTATTTTTCCTTATAAGTCCTTTGTTTTCTTCTTCAAT
TTTTGCTTTAGGGACTTATTCAGAAGGTTGGGCAGTAGTAAAATTGATACAGTTTGAAAGCCGCGGACTTATTTTCGATT
CTTATGAGGGAATTTTAGAATTTACTACCTATGATAAATCCGAAAAATGCGAGCCATCCAAGGACGAATGTTTTTCTCCA
TTAAAAGAAAAAGTAGAGTTTTCTGTTCGTCCCGAAAATGCAGAAACCGTAAATTTTTTAAGTAATAGTTTAAATCAAGA
AATTTTGATCCAATACAAAATCCATAAAATTGAACCTGCCGCTCTTTCAACCGATTTTGAAATTATTTCTGCTCAAAGAC
AAATCTCTACTATTCCTAAGGAAGTAACAGAGAAAATTATCGTAGATAAAACAGGATCCAAAAGAAATTTTTCGGTTTCA
GGTAGAATTCTTCAATTAGATTATCAAGGAACTGCAATTGGAACTTATGAAGGTTTATATCTGGACGAAGTTCGTGGAAA
AGTTCATCCTTTTTCGATTACGAATGATCAAGTGGCCGAATTTGCTTGGAATACGATGAAATTTGGAACAAAGTATTTCA
TAGGTATTTCCGTCGCTTTTGCAACTGGTTGGAGGAAATCGGATTATGATATTTTTGAAATCAATTATAAATCTCCAGCA
GGCGGCGTTTATACCGATTTGAAAAAGTGA

Upstream 100 bases:

>100_bases
TTACTACATAGGGTATCCAGGATTTTGCGTGTTTATCAGAAACTTGACTCAAAATTCATGGATTTTATTCTGTAGAAATT
AGTAAAACCTAAGAAAGTTT

Downstream 100 bases:

>100_bases
TTCTTTCTTATAACTTTAGTCAAAGATAAAAACTTTTCTTTTAAATAAAGAGGGCGGTCTACCGACCTCTTTAAACAAAA
TCTTTAATTAAAAAGAATAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MECIMFKILKRMSVLFFLISPLFSSSIFALGTYSEGWAVVKLIQFESRGLIFDSYEGILEFTTYDKSEKCEPSKDECFSP
LKEKVEFSVRPENAETVNFLSNSLNQEILIQYKIHKIEPAALSTDFEIISAQRQISTIPKEVTEKIIVDKTGSKRNFSVS
GRILQLDYQGTAIGTYEGLYLDEVRGKVHPFSITNDQVAEFAWNTMKFGTKYFIGISVAFATGWRKSDYDIFEINYKSPA
GGVYTDLKK

Sequences:

>Translated_249_residues
MECIMFKILKRMSVLFFLISPLFSSSIFALGTYSEGWAVVKLIQFESRGLIFDSYEGILEFTTYDKSEKCEPSKDECFSP
LKEKVEFSVRPENAETVNFLSNSLNQEILIQYKIHKIEPAALSTDFEIISAQRQISTIPKEVTEKIIVDKTGSKRNFSVS
GRILQLDYQGTAIGTYEGLYLDEVRGKVHPFSITNDQVAEFAWNTMKFGTKYFIGISVAFATGWRKSDYDIFEINYKSPA
GGVYTDLKK
>Mature_249_residues
MECIMFKILKRMSVLFFLISPLFSSSIFALGTYSEGWAVVKLIQFESRGLIFDSYEGILEFTTYDKSEKCEPSKDECFSP
LKEKVEFSVRPENAETVNFLSNSLNQEILIQYKIHKIEPAALSTDFEIISAQRQISTIPKEVTEKIIVDKTGSKRNFSVS
GRILQLDYQGTAIGTYEGLYLDEVRGKVHPFSITNDQVAEFAWNTMKFGTKYFIGISVAFATGWRKSDYDIFEINYKSPA
GGVYTDLKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28366; Mature: 28366

Theoretical pI: Translated: 5.46; Mature: 5.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MECIMFKILKRMSVLFFLISPLFSSSIFALGTYSEGWAVVKLIQFESRGLIFDSYEGILE
CHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEEEEEEECCCCCEEECCCCEEE
FTTYDKSEKCEPSKDECFSPLKEKVEFSVRPENAETVNFLSNSLNQEILIQYKIHKIEPA
EEECCCCCCCCCCHHHHHHHHHHHEEEEECCCCCHHHHHHHHCCCCEEEEEEEEEEECCC
ALSTDFEIISAQRQISTIPKEVTEKIIVDKTGSKRNFSVSGRILQLDYQGTAIGTYEGLY
CCCCCHHHHHHHHHHHHHHHHHHHHEEEECCCCCCEEEECCEEEEEEECCCEEECCCCEE
LDEVRGKVHPFSITNDQVAEFAWNTMKFGTKYFIGISVAFATGWRKSDYDIFEINYKSPA
HHHHCCCCCCEECCCHHHHHHHHHHHHCCCEEEEEEEEEEECCCCCCCCEEEEEEECCCC
GGVYTDLKK
CCCCCCCCC
>Mature Secondary Structure
MECIMFKILKRMSVLFFLISPLFSSSIFALGTYSEGWAVVKLIQFESRGLIFDSYEGILE
CHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEEEEEEECCCCCEEECCCCEEE
FTTYDKSEKCEPSKDECFSPLKEKVEFSVRPENAETVNFLSNSLNQEILIQYKIHKIEPA
EEECCCCCCCCCCHHHHHHHHHHHEEEEECCCCCHHHHHHHHCCCCEEEEEEEEEEECCC
ALSTDFEIISAQRQISTIPKEVTEKIIVDKTGSKRNFSVSGRILQLDYQGTAIGTYEGLY
CCCCCHHHHHHHHHHHHHHHHHHHHEEEECCCCCCEEEECCEEEEEEECCCEEECCCCEE
LDEVRGKVHPFSITNDQVAEFAWNTMKFGTKYFIGISVAFATGWRKSDYDIFEINYKSPA
HHHHCCCCCCEECCCHHHHHHHHHHHHCCCEEEEEEEEEEECCCCCCCCEEEEEEECCCC
GGVYTDLKK
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA