Click here to switch to the map view.

The map label for this gene is 45656883

Identifier: 45656883

GI number: 45656883

Start: 1211402

End: 1212526

Strand: Reverse

Name: 45656883

Synonym: LIC10995

Alternate gene names: NA

Gene position: 1212526-1211402 (Counterclockwise)

Preceding gene: 45656887

Following gene: 45656874

Centisome position: 28.35

GC content: 39.56

Gene sequence:

>1125_bases
ATGAAGATTCAATTGGGTATTCAAAATCGATTTAGGAAAGTGGGACTCACCCTATGTTTCTTAATTTTTTTGTTTGGCGT
AAATTCGATTAACGCCTCTTATGCGAAAGAAATTCTCACCTATGATTTGATAGGTCGTAATTTCTATTCCCTTAAAACCA
CCTATTATACAATCAACGTAGTTCATTATAAATACGTAAGAGATCCGGGTAGTCCGATCATTTTCAAGCCTAGATCGGTT
TTGTTCGTTCACGGTTTTGGAGATAATAGTACTCTTTTTGAACCTCTGGCAAAAGAATTAATCCTCAAAGGAAAAGCTCA
AAACGTTTATATTATGGATCTTCCCGGACACGGCGCCAGCACTATGGCCCCTGGAACATCAGAATATCCAGCTAACTATA
GTCAGTTGAGTGTTACAAATTATGCTGATGCACTCCGTGCTTTACTTGGTAGAATGACCAGCACGGAAGGTAAAAAAATC
CAGACCATCGTTGGTCATAGTACAGGCGGGTTAGTCATTCAAACGATACAAGATTTATTTCATAGAAATGGCGGCAACCT
TTTGAGCTCATTCGGTATCGAAAACACAATCTTACTTGGCAGCGATATTCCTTCTCCTTTGCCTTGGTATGGTGGAGACG
CTCCTATGAGTGATCCAAACTCTGCAAAAAGTTTTGTTTGGAATTTTAGAATATTAAAAATTTTAGGTAGTCTTCCCGAT
CCGCCTTATGCCGAATTTGGTTGGTTCGTAAAAACTCCAGACGACTTCTATATTAATACGAAATACGCCGTAAACGGAGT
TCCGGTTACGGGAGCACCTACCACCGAACAACTAAAAACGATGAGCGATCTAGAGCCTTACGTAGCAGCCGCGAATATTG
TTGGTTTAGATTATACCGCCCAAACTACGGACGCCGTCCCTAGAATATCTGTTGCACAAAATTTATGGAACGGTTTTAAT
CTGAAAGTTGTATGGATGGATAAAGACGTTTTTTTCAGTCAGTCTGAAACACAAGGCCTTGCTCAATATCTTAAAGAAGG
TTTAAACGCGATCACTATTTCCGATCCGGAAGCAACTCATAACTCTCCGTTTTCTAAACCATCTCTTTTTCTTTCTCTTT
TTTAA

Upstream 100 bases:

>100_bases
TAATCTGAAAAATGATCTTTCCGTATCGCTTCATTAAAATCAAAGAAATTTATATAGAGATAGAGTTCTCTTTTTAGATT
AAACAGGGAGATAAATATTT

Downstream 100 bases:

>100_bases
TTTTTTTTATGTCTCGCCGCACCAAAAGGTGCGGCACTCTAACAACTGTTCTATACTTTTATACAAAATAACATTTCAAT
ATAATAATATTCTTTTACCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 374; Mature: 374

Protein sequence:

>374_residues
MKIQLGIQNRFRKVGLTLCFLIFLFGVNSINASYAKEILTYDLIGRNFYSLKTTYYTINVVHYKYVRDPGSPIIFKPRSV
LFVHGFGDNSTLFEPLAKELILKGKAQNVYIMDLPGHGASTMAPGTSEYPANYSQLSVTNYADALRALLGRMTSTEGKKI
QTIVGHSTGGLVIQTIQDLFHRNGGNLLSSFGIENTILLGSDIPSPLPWYGGDAPMSDPNSAKSFVWNFRILKILGSLPD
PPYAEFGWFVKTPDDFYINTKYAVNGVPVTGAPTTEQLKTMSDLEPYVAAANIVGLDYTAQTTDAVPRISVAQNLWNGFN
LKVVWMDKDVFFSQSETQGLAQYLKEGLNAITISDPEATHNSPFSKPSLFLSLF

Sequences:

>Translated_374_residues
MKIQLGIQNRFRKVGLTLCFLIFLFGVNSINASYAKEILTYDLIGRNFYSLKTTYYTINVVHYKYVRDPGSPIIFKPRSV
LFVHGFGDNSTLFEPLAKELILKGKAQNVYIMDLPGHGASTMAPGTSEYPANYSQLSVTNYADALRALLGRMTSTEGKKI
QTIVGHSTGGLVIQTIQDLFHRNGGNLLSSFGIENTILLGSDIPSPLPWYGGDAPMSDPNSAKSFVWNFRILKILGSLPD
PPYAEFGWFVKTPDDFYINTKYAVNGVPVTGAPTTEQLKTMSDLEPYVAAANIVGLDYTAQTTDAVPRISVAQNLWNGFN
LKVVWMDKDVFFSQSETQGLAQYLKEGLNAITISDPEATHNSPFSKPSLFLSLF
>Mature_374_residues
MKIQLGIQNRFRKVGLTLCFLIFLFGVNSINASYAKEILTYDLIGRNFYSLKTTYYTINVVHYKYVRDPGSPIIFKPRSV
LFVHGFGDNSTLFEPLAKELILKGKAQNVYIMDLPGHGASTMAPGTSEYPANYSQLSVTNYADALRALLGRMTSTEGKKI
QTIVGHSTGGLVIQTIQDLFHRNGGNLLSSFGIENTILLGSDIPSPLPWYGGDAPMSDPNSAKSFVWNFRILKILGSLPD
PPYAEFGWFVKTPDDFYINTKYAVNGVPVTGAPTTEQLKTMSDLEPYVAAANIVGLDYTAQTTDAVPRISVAQNLWNGFN
LKVVWMDKDVFFSQSETQGLAQYLKEGLNAITISDPEATHNSPFSKPSLFLSLF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41320; Mature: 41320

Theoretical pI: Translated: 7.71; Mature: 7.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIQLGIQNRFRKVGLTLCFLIFLFGVNSINASYAKEILTYDLIGRNFYSLKTTYYTINV
CEEEECHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEEEEEEEEEEE
VHYKYVRDPGSPIIFKPRSVLFVHGFGDNSTLFEPLAKELILKGKAQNVYIMDLPGHGAS
EEEEEEECCCCCEEECCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCC
TMAPGTSEYPANYSQLSVTNYADALRALLGRMTSTEGKKIQTIVGHSTGGLVIQTIQDLF
CCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHH
HRNGGNLLSSFGIENTILLGSDIPSPLPWYGGDAPMSDPNSAKSFVWNFRILKILGSLPD
HCCCCCHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC
PPYAEFGWFVKTPDDFYINTKYAVNGVPVTGAPTTEQLKTMSDLEPYVAAANIVGLDYTA
CCCHHCCCEEECCCCEEEEEEEEECCEECCCCCCHHHHHHHHHCCHHHHHHEEEECCCCC
QTTDAVPRISVAQNLWNGFNLKVVWMDKDVFFSQSETQGLAQYLKEGLNAITISDPEATH
CCCCCCCHHHHHHHHCCCCCEEEEEEECCEEECCCHHHHHHHHHHHCCCEEEECCCCCCC
NSPFSKPSLFLSLF
CCCCCCCCEEEEEC
>Mature Secondary Structure
MKIQLGIQNRFRKVGLTLCFLIFLFGVNSINASYAKEILTYDLIGRNFYSLKTTYYTINV
CEEEECHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEEEEEEEEEEE
VHYKYVRDPGSPIIFKPRSVLFVHGFGDNSTLFEPLAKELILKGKAQNVYIMDLPGHGAS
EEEEEEECCCCCEEECCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCC
TMAPGTSEYPANYSQLSVTNYADALRALLGRMTSTEGKKIQTIVGHSTGGLVIQTIQDLF
CCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHH
HRNGGNLLSSFGIENTILLGSDIPSPLPWYGGDAPMSDPNSAKSFVWNFRILKILGSLPD
HCCCCCHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC
PPYAEFGWFVKTPDDFYINTKYAVNGVPVTGAPTTEQLKTMSDLEPYVAAANIVGLDYTA
CCCHHCCCEEECCCCEEEEEEEEECCEECCCCCCHHHHHHHHHCCHHHHHHEEEECCCCC
QTTDAVPRISVAQNLWNGFNLKVVWMDKDVFFSQSETQGLAQYLKEGLNAITISDPEATH
CCCCCCCHHHHHHHHCCCCCEEEEEEECCEEECCCHHHHHHHHHHHCCCEEEECCCCCCC
NSPFSKPSLFLSLF
CCCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA