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The map label for this gene is prrC

Identifier: 45656818

GI number: 45656818

Start: 1121249

End: 1122400

Strand: Reverse

Name: prrC

Synonym: LIC10930

Alternate gene names: 45656818

Gene position: 1122400-1121249 (Counterclockwise)

Preceding gene: 45656819

Following gene: 45656817

Centisome position: 26.24

GC content: 37.67

Gene sequence:

>1152_bases
ATGAGCATGGATATAGCAAAGCTTTTAAAAGATGCCGATCAAAAAGTCCAGTTGCTCTATGCATTTAATGGCACGGGCAA
GACTCGCCTTTCCAGGGAATTCAAACAGCTCGTTGCACCCAAAAACAATCGTGATGAGGCAGATCAAGCTGAGTCATCGC
ATAACAAAATTCTTTACTATAACGCCTTTACCAAAGATTTATTTTACTGGGATAACGACTTAGAGAAAGATGCGGAACCA
AAATTAAAAATTCAATCCAATTCGTTCACGGATTGGATACTGAAAGACCAAGGACAAGATCGCAATATCATAACTAATTT
TCAGCATTATACCAACAAAAAGCTAACGCCACGATTCAATGAAGCATACACCGTCAAAGATAAAAACGAGCAAGAGGTTA
TTGTTAAAGAGTTTTCGGAAGTAACCTTCTCCCTGACACGGGGCAACGAAGAGCGTTCGGGTAATCTTAAAATTTCCAAA
GGCGAAGAGAGCAATTTCATTTGGAGTATTTTTTACAGTTTACTGGAACAAGTTATCAGTGTTCTAAATGTCATCGATTC
AAGTGAACAGGAAACGGACCAATTTGATCAGTTGGAATACGTGTTTATTGATGATCCTGTCAGCTCCTTAGATGAGAACC
ATTTAATTGAACTAGCGGCGGAACTGATTCAGTCCAGTAAATCAGATATTAGATTTCTAATCACAACCCATAATCCGCTT
TTTTATAATGTGCTTCACAATGAATTTAAGAAAGATACTTTCAAAAAATATATCCTGAAAAAACAGGAAGATGAAAGCTA
TGAATTAGCGAACCAATCCACTGATTCTCCTTTTTCTTACCATCTTCATCTTAAAGCCGAACTCGAGAAGGCGATCGAAA
CAGGTCAGTTACATAAATATCATTTCAATTTTCTCAGAAACATTCTAGAAAAGACTTCTACGTTTGTCGGACTGGAGAGA
TGGGAAGATCTGTTATCAAAAACAGAGGATGGCGATCCGAATCCTTATGAGGTTCGAATTATCAATTTCTCAAGCCATTC
CAAACATTCAGATAATGAAGTCGTTGAGGTTCCGGATGAGCACAGGCGAATTCTAAGCTTTCTGGTTAAAAAGCTCGATG
AAATGTATCGTTTAAGAATGCGTACCAAATAA

Upstream 100 bases:

>100_bases
TCAGCGAAGGTCTGCCTCGCGAAATTGAACTACGTCAAAAGCAATATGAGTACTATCGTGAATTATTGTTGAGCTTCCCG
AAAGCAGAAGCGGGGCCGAA

Downstream 100 bases:

>100_bases
GATCCGAAGGCAATTGAATGACTGAATACAAAACCATAGCCGAATCCAATCACTTTATCGTTTTAGATAAATACAACAGG
GAGTGGCAGGTAAGCGAAAG

Product: anticodon nuclease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 383; Mature: 382

Protein sequence:

>383_residues
MSMDIAKLLKDADQKVQLLYAFNGTGKTRLSREFKQLVAPKNNRDEADQAESSHNKILYYNAFTKDLFYWDNDLEKDAEP
KLKIQSNSFTDWILKDQGQDRNIITNFQHYTNKKLTPRFNEAYTVKDKNEQEVIVKEFSEVTFSLTRGNEERSGNLKISK
GEESNFIWSIFYSLLEQVISVLNVIDSSEQETDQFDQLEYVFIDDPVSSLDENHLIELAAELIQSSKSDIRFLITTHNPL
FYNVLHNEFKKDTFKKYILKKQEDESYELANQSTDSPFSYHLHLKAELEKAIETGQLHKYHFNFLRNILEKTSTFVGLER
WEDLLSKTEDGDPNPYEVRIINFSSHSKHSDNEVVEVPDEHRRILSFLVKKLDEMYRLRMRTK

Sequences:

>Translated_383_residues
MSMDIAKLLKDADQKVQLLYAFNGTGKTRLSREFKQLVAPKNNRDEADQAESSHNKILYYNAFTKDLFYWDNDLEKDAEP
KLKIQSNSFTDWILKDQGQDRNIITNFQHYTNKKLTPRFNEAYTVKDKNEQEVIVKEFSEVTFSLTRGNEERSGNLKISK
GEESNFIWSIFYSLLEQVISVLNVIDSSEQETDQFDQLEYVFIDDPVSSLDENHLIELAAELIQSSKSDIRFLITTHNPL
FYNVLHNEFKKDTFKKYILKKQEDESYELANQSTDSPFSYHLHLKAELEKAIETGQLHKYHFNFLRNILEKTSTFVGLER
WEDLLSKTEDGDPNPYEVRIINFSSHSKHSDNEVVEVPDEHRRILSFLVKKLDEMYRLRMRTK
>Mature_382_residues
SMDIAKLLKDADQKVQLLYAFNGTGKTRLSREFKQLVAPKNNRDEADQAESSHNKILYYNAFTKDLFYWDNDLEKDAEPK
LKIQSNSFTDWILKDQGQDRNIITNFQHYTNKKLTPRFNEAYTVKDKNEQEVIVKEFSEVTFSLTRGNEERSGNLKISKG
EESNFIWSIFYSLLEQVISVLNVIDSSEQETDQFDQLEYVFIDDPVSSLDENHLIELAAELIQSSKSDIRFLITTHNPLF
YNVLHNEFKKDTFKKYILKKQEDESYELANQSTDSPFSYHLHLKAELEKAIETGQLHKYHFNFLRNILEKTSTFVGLERW
EDLLSKTEDGDPNPYEVRIINFSSHSKHSDNEVVEVPDEHRRILSFLVKKLDEMYRLRMRTK

Specific function: Anticodon nuclease triggers the cleavage ligation of tRNA(Lys). It is activated by T4 stp protein [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45116; Mature: 44985

Theoretical pI: Translated: 5.26; Mature: 5.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSMDIAKLLKDADQKVQLLYAFNGTGKTRLSREFKQLVAPKNNRDEADQAESSHNKILYY
CCCCHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHHHHCCCCCCCHHHHHHCCCCEEEEE
NAFTKDLFYWDNDLEKDAEPKLKIQSNSFTDWILKDQGQDRNIITNFQHYTNKKLTPRFN
ECHHHHHHCCCCCCCCCCCCCEEEECCCCCCHHCCCCCCCCCCEECHHHHCCCCCCCCCC
EAYTVKDKNEQEVIVKEFSEVTFSLTRGNEERSGNLKISKGEESNFIWSIFYSLLEQVIS
CEEEECCCCCHHHHHHHHHHHEEEEECCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHH
VLNVIDSSEQETDQFDQLEYVFIDDPVSSLDENHLIELAAELIQSSKSDIRFLITTHNPL
HHHHHCCCCHHHHHHHCEEEEEECCCHHHCCHHHHHHHHHHHHHCCCCCEEEEEEECCCC
FYNVLHNEFKKDTFKKYILKKQEDESYELANQSTDSPFSYHLHLKAELEKAIETGQLHKY
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCEEEEEEEHHHHHHHHHCCCHHHH
HFNFLRNILEKTSTFVGLERWEDLLSKTEDGDPNPYEVRIINFSSHSKHSDNEVVEVPDE
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCCCEEECCHH
HRRILSFLVKKLDEMYRLRMRTK
HHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SMDIAKLLKDADQKVQLLYAFNGTGKTRLSREFKQLVAPKNNRDEADQAESSHNKILYY
CCCHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHHHHCCCCCCCHHHHHHCCCCEEEEE
NAFTKDLFYWDNDLEKDAEPKLKIQSNSFTDWILKDQGQDRNIITNFQHYTNKKLTPRFN
ECHHHHHHCCCCCCCCCCCCCEEEECCCCCCHHCCCCCCCCCCEECHHHHCCCCCCCCCC
EAYTVKDKNEQEVIVKEFSEVTFSLTRGNEERSGNLKISKGEESNFIWSIFYSLLEQVIS
CEEEECCCCCHHHHHHHHHHHEEEEECCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHH
VLNVIDSSEQETDQFDQLEYVFIDDPVSSLDENHLIELAAELIQSSKSDIRFLITTHNPL
HHHHHCCCCHHHHHHHCEEEEEECCCHHHCCHHHHHHHHHHHHHCCCCCEEEEEEECCCC
FYNVLHNEFKKDTFKKYILKKQEDESYELANQSTDSPFSYHLHLKAELEKAIETGQLHKY
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCEEEEEEEHHHHHHHHHCCCHHHH
HFNFLRNILEKTSTFVGLERWEDLLSKTEDGDPNPYEVRIINFSSHSKHSDNEVVEVPDE
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCCCEEECCHH
HRRILSFLVKKLDEMYRLRMRTK
HHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1691706 [H]