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The map label for this gene is 45656788

Identifier: 45656788

GI number: 45656788

Start: 1081360

End: 1082103

Strand: Reverse

Name: 45656788

Synonym: LIC10897

Alternate gene names: NA

Gene position: 1082103-1081360 (Counterclockwise)

Preceding gene: 45656789

Following gene: 45656787

Centisome position: 25.3

GC content: 28.9

Gene sequence:

>744_bases
ATGTCTCAAAAGAAATTCGAAAATAAAATTCTCCAAAAATCGTTTTATCGGACAAAAAAAGTAAACGAGATTATTACATA
CAATCAATCTACTTTTTATAGAAATCAAACAATCCCATCTTTTTTCATTCCAAATCAATTTGTTTTATTTAATATTCTAA
TATTTATATTTTTATCAGTCCTCACGCTTAATTGCAAAAAGAATAATCCAAAACCAGACTTAAATAAAGAACTTACAGAC
CCTAAACATACATTAGAAATTCAAAAAGATCAAGAAACTCTAAAATCAGAAATCAAAGAATCTTATAAAATCCAAAACTC
TTCGTCTTCGGTTGAAAAAGCCATTCAAATCGCTCTGACGGAAATTAGAGACAATCCAAACAGACCGGATAATTTACTTC
GTTATTCCTGTAACCCGGAAGAAATTAGAAAAATCTATCTTCCTAATAATGTAAATCAAAACAATATAACAGCAAATTCT
AAAATAGAAGATTCTATGTATTTGATTCTTTTAAGAAGAACCGCCGGTTTAGATAAAATTAGAAAACAATTTCAAAATAC
AAAAGGGAATTTTAAAATTCTCCCACTTAGTCAGCCGTATAACATTCGTAAGCTGACCAATATCAATGGATATATCATTG
GTGAATTCGATCTTCAAGTAGGATCAAAAACGATCCGAATCGAAGAGATCAAACTCGTTATAGAACATAAAAATCAATTT
AAAGTTTGTACGTACGGAACATGA

Upstream 100 bases:

>100_bases
GGTTGGACCGTTTATAGAGCGAGATAAATTTATATATTAGGATTCCCTAATTTGGGAATCCTAATTCAAAATTTTTAATC
TATTTTAAAATCATTAGAAC

Downstream 100 bases:

>100_bases
AACATAAAATTCTAAGTTTATTCTTTTTTCTCTCTCTAATAACAAGTCCGGTATTAGGTCAATCCACCGGTAAACTGGTT
GGTAAAATCGTGGATTCGGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 247; Mature: 246

Protein sequence:

>247_residues
MSQKKFENKILQKSFYRTKKVNEIITYNQSTFYRNQTIPSFFIPNQFVLFNILIFIFLSVLTLNCKKNNPKPDLNKELTD
PKHTLEIQKDQETLKSEIKESYKIQNSSSSVEKAIQIALTEIRDNPNRPDNLLRYSCNPEEIRKIYLPNNVNQNNITANS
KIEDSMYLILLRRTAGLDKIRKQFQNTKGNFKILPLSQPYNIRKLTNINGYIIGEFDLQVGSKTIRIEEIKLVIEHKNQF
KVCTYGT

Sequences:

>Translated_247_residues
MSQKKFENKILQKSFYRTKKVNEIITYNQSTFYRNQTIPSFFIPNQFVLFNILIFIFLSVLTLNCKKNNPKPDLNKELTD
PKHTLEIQKDQETLKSEIKESYKIQNSSSSVEKAIQIALTEIRDNPNRPDNLLRYSCNPEEIRKIYLPNNVNQNNITANS
KIEDSMYLILLRRTAGLDKIRKQFQNTKGNFKILPLSQPYNIRKLTNINGYIIGEFDLQVGSKTIRIEEIKLVIEHKNQF
KVCTYGT
>Mature_246_residues
SQKKFENKILQKSFYRTKKVNEIITYNQSTFYRNQTIPSFFIPNQFVLFNILIFIFLSVLTLNCKKNNPKPDLNKELTDP
KHTLEIQKDQETLKSEIKESYKIQNSSSSVEKAIQIALTEIRDNPNRPDNLLRYSCNPEEIRKIYLPNNVNQNNITANSK
IEDSMYLILLRRTAGLDKIRKQFQNTKGNFKILPLSQPYNIRKLTNINGYIIGEFDLQVGSKTIRIEEIKLVIEHKNQFK
VCTYGT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28961; Mature: 28830

Theoretical pI: Translated: 10.14; Mature: 10.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQKKFENKILQKSFYRTKKVNEIITYNQSTFYRNQTIPSFFIPNQFVLFNILIFIFLSV
CCHHHHHHHHHHHHHHHHHHHHHHEEECCCEEEECCCCCEEECCCHHHHHHHHHHHHHHH
LTLNCKKNNPKPDLNKELTDPKHTLEIQKDQETLKSEIKESYKIQNSSSSVEKAIQIALT
HEEECCCCCCCCCCCCCCCCCHHEEEECHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
EIRDNPNRPDNLLRYSCNPEEIRKIYLPNNVNQNNITANSKIEDSMYLILLRRTAGLDKI
HHCCCCCCCCHHEEECCCHHHHEEEECCCCCCCCCCCCCCCCCCCEEEEEEEHHCCHHHH
RKQFQNTKGNFKILPLSQPYNIRKLTNINGYIIGEFDLQVGSKTIRIEEIKLVIEHKNQF
HHHHHCCCCCEEEEECCCCCCCEEEECCCCEEEEEEEEEECCEEEEEEEEEEEEECCCCE
KVCTYGT
EEEECCC
>Mature Secondary Structure 
SQKKFENKILQKSFYRTKKVNEIITYNQSTFYRNQTIPSFFIPNQFVLFNILIFIFLSV
CHHHHHHHHHHHHHHHHHHHHHHEEECCCEEEECCCCCEEECCCHHHHHHHHHHHHHHH
LTLNCKKNNPKPDLNKELTDPKHTLEIQKDQETLKSEIKESYKIQNSSSSVEKAIQIALT
HEEECCCCCCCCCCCCCCCCCHHEEEECHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
EIRDNPNRPDNLLRYSCNPEEIRKIYLPNNVNQNNITANSKIEDSMYLILLRRTAGLDKI
HHCCCCCCCCHHEEECCCHHHHEEEECCCCCCCCCCCCCCCCCCCEEEEEEEHHCCHHHH
RKQFQNTKGNFKILPLSQPYNIRKLTNINGYIIGEFDLQVGSKTIRIEEIKLVIEHKNQF
HHHHHCCCCCEEEEECCCCCCCEEEECCCCEEEEEEEEEECCEEEEEEEEEEEEECCCCE
KVCTYGT
EEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA