| Definition | Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_005823 |
| Length | 4,277,185 |
Click here to switch to the map view.
The map label for this gene is 45656785
Identifier: 45656785
GI number: 45656785
Start: 1077790
End: 1077978
Strand: Reverse
Name: 45656785
Synonym: LIC10894
Alternate gene names: NA
Gene position: 1077978-1077790 (Counterclockwise)
Preceding gene: 45656786
Following gene: 45656784
Centisome position: 25.2
GC content: 30.16
Gene sequence:
>189_bases ATGAGCTTGTTTCAAAAGATGAATATACAATCTCCTTTGAAAACGGCCAATAATCCCCAGATTAGACACAATTTTTGTGG ACTTCCGTATTTTTGTAAAATCGACGGTTCATTTCGAATACTATTTTCATACGTTCGAATTGTAAAAATCTATTCAAAAT CTTTATATGCATACGCAAATACTTTATAA
Upstream 100 bases:
>100_bases ATTTTTACTACAAAAAACTATTTGAATATAAAATATTTAGTTTTCCTCTGTTATCTAGCTCCGAGCAACTTACAGTTAAG ACGTATAAAAAAATACTACC
Downstream 100 bases:
>100_bases TTTTCTAATAAACTGCTGAAGCTCCCACAAAAACGGTTATCTTGGGATATTTGCGAACTTTCCAGTAATCTTTAGGTTTT AGGACTGATTCTAAATTAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 62; Mature: 61
Protein sequence:
>62_residues MSLFQKMNIQSPLKTANNPQIRHNFCGLPYFCKIDGSFRILFSYVRIVKIYSKSLYAYANTL
Sequences:
>Translated_62_residues MSLFQKMNIQSPLKTANNPQIRHNFCGLPYFCKIDGSFRILFSYVRIVKIYSKSLYAYANTL >Mature_61_residues SLFQKMNIQSPLKTANNPQIRHNFCGLPYFCKIDGSFRILFSYVRIVKIYSKSLYAYANTL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7255; Mature: 7123
Theoretical pI: Translated: 10.25; Mature: 10.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLFQKMNIQSPLKTANNPQIRHNFCGLPYFCKIDGSFRILFSYVRIVKIYSKSLYAYAN CCCCHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHC TL CC >Mature Secondary Structure SLFQKMNIQSPLKTANNPQIRHNFCGLPYFCKIDGSFRILFSYVRIVKIYSKSLYAYAN CCCHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHC TL CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA