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The map label for this gene is 45656678

Identifier: 45656678

GI number: 45656678

Start: 952875

End: 953138

Strand: Reverse

Name: 45656678

Synonym: LIC10785

Alternate gene names: NA

Gene position: 953138-952875 (Counterclockwise)

Preceding gene: 45656683

Following gene: 45656677

Centisome position: 22.28

GC content: 40.53

Gene sequence:

>264_bases
GTGAGAATGAAAGGAAGAAGAAAATATTCGCCAGAGTTTCGGGAACAAGCGGTAAACCGGACGTTAAACGGATCGTTTAC
AATAAAAGAAGTAGCAGAGTCCTTAGGAGTTAGCTACTTTGTATTGAGACAATGGAAGGCCGAGCATTTGAAAAAGAAGG
AAACAGAGCAACCACTTCCGGATAAACAGCTAAAGGAAAGCGAAGAGTTGAAAAGACTTCGTAAAGAGAATCTGAGATTA
AAGGATGAGAGAACGCGATCTTAA

Upstream 100 bases:

>100_bases
TTCCACTTGTAACCTAAATCCACAGAAACTTCCTTCGGTCGAAAACTGACCTAGTAACATAAAAGTAGACACCTTTTTTT
TCCAAGAATAGAGGTAAAAG

Downstream 100 bases:

>100_bases
AAAAGTTTGCGGCCATGCTTTCCCGCGAACAGAATCCCGATTGAAGTTCATGAAATCGAATTGCTTAGAGCATAGTATAG
GGAGCATGGCAAGAGTTTTA

Product: transposase, IS1501

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 87; Mature: 87

Protein sequence:

>87_residues
MRMKGRRKYSPEFREQAVNRTLNGSFTIKEVAESLGVSYFVLRQWKAEHLKKKETEQPLPDKQLKESEELKRLRKENLRL
KDERTRS

Sequences:

>Translated_87_residues
MRMKGRRKYSPEFREQAVNRTLNGSFTIKEVAESLGVSYFVLRQWKAEHLKKKETEQPLPDKQLKESEELKRLRKENLRL
KDERTRS
>Mature_87_residues
MRMKGRRKYSPEFREQAVNRTLNGSFTIKEVAESLGVSYFVLRQWKAEHLKKKETEQPLPDKQLKESEELKRLRKENLRL
KDERTRS

Specific function: Unknown

COG id: COG2963

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10506; Mature: 10506

Theoretical pI: Translated: 10.82; Mature: 10.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRMKGRRKYSPEFREQAVNRTLNGSFTIKEVAESLGVSYFVLRQWKAEHLKKKETEQPLP
CCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCC
DKQLKESEELKRLRKENLRLKDERTRS
CHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MRMKGRRKYSPEFREQAVNRTLNGSFTIKEVAESLGVSYFVLRQWKAEHLKKKETEQPLP
CCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCC
DKQLKESEELKRLRKENLRLKDERTRS
CHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA