Click here to switch to the map view.

The map label for this gene is 45656660

Identifier: 45656660

GI number: 45656660

Start: 931865

End: 932299

Strand: Reverse

Name: 45656660

Synonym: LIC10766

Alternate gene names: NA

Gene position: 932299-931865 (Counterclockwise)

Preceding gene: 45656661

Following gene: 45656653

Centisome position: 21.8

GC content: 37.24

Gene sequence:

>435_bases
ATGAAATCGATTCAACTATTTTTAATAGTAACAACGTTGTTACTATCCATCTATCACTGTTCGTCCTCTCCTTCTACTGA
AATAGAAAACGAACGTCCTAAAAAAACTACTACGGTAATGGAAGAATCCAACGAAAGTTCAGGTGATGAATTTATCAAAG
CTACCGAGGGTTTTCTAAACGCGGATACGTTCCAAGTAGTAGTTTCTTCTTTAGAAGGAAACGCGGATGGAGCCCAAGAT
CTGGCTCGTAAAAGGGCTCTTAATCTTCTCATTGCAGAAAAAGGAGACAAGTTTCGTCCTTCTGATAAATCGGTTCTCAA
AGAGTTAGTAGAATCTAAAGGGCAAATCATAAAATCTTCCGGTCCGATCCAAGGAAAAATTTACTTTTTATTTCAGATTT
CGTCTCCTGGTTTAAAAACAAGTTTGAAACGTTAG

Upstream 100 bases:

>100_bases
ATTGTACTTTCATTTATAGAAATATTCAGCAAGATTTGTATGCAAACGTTATACGAAAGGGATTAAAACCTATTTCCAAA
GAAGAAGTATCGGAGGCGCC

Downstream 100 bases:

>100_bases
TCTCCATTTTATTTTAAATAAAGTTTTTAAAAAATCTAAATCTATTTTTACTACTCGAACGTATAAAAATGGTCCCCAAA
ACTAACCGTCAATTTTACAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 144; Mature: 144

Protein sequence:

>144_residues
MKSIQLFLIVTTLLLSIYHCSSSPSTEIENERPKKTTTVMEESNESSGDEFIKATEGFLNADTFQVVVSSLEGNADGAQD
LARKRALNLLIAEKGDKFRPSDKSVLKELVESKGQIIKSSGPIQGKIYFLFQISSPGLKTSLKR

Sequences:

>Translated_144_residues
MKSIQLFLIVTTLLLSIYHCSSSPSTEIENERPKKTTTVMEESNESSGDEFIKATEGFLNADTFQVVVSSLEGNADGAQD
LARKRALNLLIAEKGDKFRPSDKSVLKELVESKGQIIKSSGPIQGKIYFLFQISSPGLKTSLKR
>Mature_144_residues
MKSIQLFLIVTTLLLSIYHCSSSPSTEIENERPKKTTTVMEESNESSGDEFIKATEGFLNADTFQVVVSSLEGNADGAQD
LARKRALNLLIAEKGDKFRPSDKSVLKELVESKGQIIKSSGPIQGKIYFLFQISSPGLKTSLKR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15842; Mature: 15842

Theoretical pI: Translated: 8.46; Mature: 8.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSIQLFLIVTTLLLSIYHCSSSPSTEIENERPKKTTTVMEESNESSGDEFIKATEGFLN
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHCCCC
ADTFQVVVSSLEGNADGAQDLARKRALNLLIAEKGDKFRPSDKSVLKELVESKGQIIKSS
CHHHHHHHHHHCCCCCCHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHCCCCEEECC
GPIQGKIYFLFQISSPGLKTSLKR
CCCCEEEEEEEEECCCCCCCCCCC
>Mature Secondary Structure
MKSIQLFLIVTTLLLSIYHCSSSPSTEIENERPKKTTTVMEESNESSGDEFIKATEGFLN
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHCCCC
ADTFQVVVSSLEGNADGAQDLARKRALNLLIAEKGDKFRPSDKSVLKELVESKGQIIKSS
CHHHHHHHHHHCCCCCCHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHCCCCEEECC
GPIQGKIYFLFQISSPGLKTSLKR
CCCCEEEEEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA