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The map label for this gene is nusG

Identifier: 45656642

GI number: 45656642

Start: 909280

End: 909825

Strand: Direct

Name: nusG

Synonym: LIC10748

Alternate gene names: 45656642

Gene position: 909280-909825 (Clockwise)

Preceding gene: 45656641

Following gene: 45656643

Centisome position: 21.26

GC content: 38.28

Gene sequence:

>546_bases
ATGGGAACAAAAAAATGGTACGCTCTTCAGACCTATTCAGGACACGAGAATAAGGTTCAGAAGAATATAGAAAAACTCAT
TCAACAAAAGAAGTTGGAAGAGAAAATTTTTCAAGTAAAGATACCTACCATGGACGTTGCCGAAATGAAAAACGGCAAAA
AGAAAGTAACTAAACGAAAATTAATGCCAGGTTACGTTCTAATTGAAATGGAAATGGATGATGATACTCGATTTTTGATT
CAATCACTTCCTTCTGTTTCTACATTTGTAGGCTCTAAAGACGGAGGCCCCGAGCCTTTGTCTTTGGAAGAAGTAAAAAA
TTTATTTTCCGAATCGGGTGATGTCGCATCTGAGGAACCAGTTGCACCTAAGATTCTCTTTAAAGTGGGGGATTCTTTAA
AAATCATCGATGGGCCTTTTGCGAACTTCACTGGGCTCGTGGACGAAATCTTTCCGGATAAAGGAAGACTTCGTGTAAAA
GTAGAAATCTTCGGGAGATCCACTCCCGTTGAACTGGATTATCTTCAGGTAAAAACTGAAAATTAA

Upstream 100 bases:

>100_bases
TTCTATTTTCCTGTTTTTTGCGGATTCGGCATTTGTAAGACTGCTGACCTGGTTTTGGGAACTGGCTGGTTAGATCAAAA
GGAATCTTAAAGTTATCTCC

Downstream 100 bases:

>100_bases
GAGAAAGAACAAAGGACGTTCTATTCATGGCAGCAAAAAAAGTAGTAAAGCAGATCAAACTTCAGGTGGAAGCAGGAAAA
GCGAATCCTGCACCTCCCGT

Product: transcription antitermination protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 181; Mature: 180

Protein sequence:

>181_residues
MGTKKWYALQTYSGHENKVQKNIEKLIQQKKLEEKIFQVKIPTMDVAEMKNGKKKVTKRKLMPGYVLIEMEMDDDTRFLI
QSLPSVSTFVGSKDGGPEPLSLEEVKNLFSESGDVASEEPVAPKILFKVGDSLKIIDGPFANFTGLVDEIFPDKGRLRVK
VEIFGRSTPVELDYLQVKTEN

Sequences:

>Translated_181_residues
MGTKKWYALQTYSGHENKVQKNIEKLIQQKKLEEKIFQVKIPTMDVAEMKNGKKKVTKRKLMPGYVLIEMEMDDDTRFLI
QSLPSVSTFVGSKDGGPEPLSLEEVKNLFSESGDVASEEPVAPKILFKVGDSLKIIDGPFANFTGLVDEIFPDKGRLRVK
VEIFGRSTPVELDYLQVKTEN
>Mature_180_residues
GTKKWYALQTYSGHENKVQKNIEKLIQQKKLEEKIFQVKIPTMDVAEMKNGKKKVTKRKLMPGYVLIEMEMDDDTRFLIQ
SLPSVSTFVGSKDGGPEPLSLEEVKNLFSESGDVASEEPVAPKILFKVGDSLKIIDGPFANFTGLVDEIFPDKGRLRVKV
EIFGRSTPVELDYLQVKTEN

Specific function: Influences transcription termination and antitermination. Acts as a component of the transcription complex, and interacts with the termination factor rho and RNA polymerase [H]

COG id: COG0250

COG function: function code K; Transcription antiterminator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 KOW domain [H]

Homologues:

Organism=Escherichia coli, GI1790414, Length=175, Percent_Identity=39.4285714285714, Blast_Score=145, Evalue=1e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005824
- InterPro:   IPR001062
- InterPro:   IPR015869
- InterPro:   IPR006645
- InterPro:   IPR014722
- InterPro:   IPR008991 [H]

Pfam domain/function: PF00467 KOW; PF02357 NusG [H]

EC number: NA

Molecular weight: Translated: 20455; Mature: 20324

Theoretical pI: Translated: 7.51; Mature: 7.51

Prosite motif: PS01014 NUSG

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGTKKWYALQTYSGHENKVQKNIEKLIQQKKLEEKIFQVKIPTMDVAEMKNGKKKVTKRK
CCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHCCCHHHHHHHH
LMPGYVLIEMEMDDDTRFLIQSLPSVSTFVGSKDGGPEPLSLEEVKNLFSESGDVASEEP
CCCCEEEEEEECCCCHHHHHHHCCCHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCC
VAPKILFKVGDSLKIIDGPFANFTGLVDEIFPDKGRLRVKVEIFGRSTPVELDYLQVKTE
CCHHHHEECCCCEEEECCCCCHHHHHHHHHCCCCCCEEEEEEEECCCCCCEEEEEEEEEC
N
C
>Mature Secondary Structure 
GTKKWYALQTYSGHENKVQKNIEKLIQQKKLEEKIFQVKIPTMDVAEMKNGKKKVTKRK
CCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHCCCHHHHHHHH
LMPGYVLIEMEMDDDTRFLIQSLPSVSTFVGSKDGGPEPLSLEEVKNLFSESGDVASEEP
CCCCEEEEEEECCCCHHHHHHHCCCHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCC
VAPKILFKVGDSLKIIDGPFANFTGLVDEIFPDKGRLRVKVEIFGRSTPVELDYLQVKTE
CCHHHHEECCCCEEEECCCCCHHHHHHHHHCCCCCCEEEEEEEECCCCCCEEEEEEEEEC
N
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11058132 [H]