| Definition | Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_005823 |
| Length | 4,277,185 |
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The map label for this gene is 45656537
Identifier: 45656537
GI number: 45656537
Start: 778736
End: 780658
Strand: Reverse
Name: 45656537
Synonym: LIC10639
Alternate gene names: NA
Gene position: 780658-778736 (Counterclockwise)
Preceding gene: 45656538
Following gene: 45656536
Centisome position: 18.25
GC content: 39.26
Gene sequence:
>1923_bases TTGAAAATGTATAATTGGAAGAAAATTCTCATAGTGGTTTTGTTAGCTTCCATCATGGTTTACTTGGAGTATGAAATGGA TCATACACTTGTACATGCTGCGTCTTCATCAAAGACCACCAACTCAATCGTTCAAAAACCCACCGATCCACCAAAAGATA AACCGATCAAAGTCAATGTAAGTGGTGGTGGAACATTTTGTTACGGTCCTAATTTTAGCGGCGGTGAAAGTTACATTATA ATTGAACAGTGTTGGCAAATGCACGTTATGAATGCAAGATACGACGTGTTTCAAAGAATTTCGTATAACATCAATAATAC GTGGTTATGTATTACTGCTCCGGAAACAGTAGTCCAAGGGGAAGAAATCTGGGACTATGTTCATCTCAGACCTTGTACAA TCAACGACCCTTTACAAAGATGGATTATAAAGGACAATTCTTTTTGGACTGCAAATGGGTTTTACCGATTAAAAGATACA AATTGGTATGGTTATATTTCTAGAAATTCTGGTGATAAATACAATCATACTTTAGATTCTTCCATGAAAGATTGGATGAA TACAATAGCCACCCCCGGAAACATCAGTATTTTAACTTCCATAGCCTGGGATTTGAATCATAGCTGGGGAAATGAACGTT ATTTTATTCGTTTGGGAGGTTCGGATAAAAATACAACTCCTCTCTACTACAATCCTGAAAATGGACATCTTGCTCAGTAT GATCCAATCAGTGGCTCTCTCTATTGTATGTATTCTCAGGTAGACAGCTATCAATGGAATTGGGTTTCCTGGGAATCGTG TAGTGACGCAGCGATCAGTAAAGATAATCCCACTTATTGGAACGTCTCTTTTGAAACAGAAGAAGGAGGAATGATCACAG ATTATAAGGGAAATGCACTAAGAGTTACTCGATATGGATCCAATTGGGGCGCTGCCTATGCAGCTAAACTTTCTTATTTA GAAAAGGACACTACCAATAGTCCCACTTCTCTGTTTATTGTTAATAAAGATTTATTAGATTGGACACGTTATACAACTTC TAATCTTGGCAAGACGGAACAATATTGTCCAGCTCCTGGTAATCAAGCAAGTACCACACATAAAAGAATTTCAAGAACCT TACCACCCAGCTTTCAATTAACTGAGGCTTGGGTTCAAAGACTTTATGAGATAACACGTTCAACTTCAGGCTCAGACATT TCAAGTGGAGTATGTGGTGTTTGTTTACTTCATGGTTTTCAAATGATAGCAGAGCTACAAGAGTATCATTCTCGAGAACC TCTTCAAAGCGGAGGTTATTTTTTTGATACAAATCCTAATACAGATCCATTTATCTCGTTTGGTCAACGTTATCCGAACT TGAATACGTCTCTGAGGGATATAGTTAGCACGTATGGTCCCACAGTTCGCTCTAGTAGAAGATTAATACTTATATCTGCT AGAACTATGTTGCCCCAGTACGAATGGAGTCTCTCTTCTGAATCCTCTACTCTTTCTGATATGTTATCCCACATTCAATC ACTTATAGATTCTCCTCCCGGAAGCATTTGGTTGGTGATCATGAGACGGTGGCGTCCAGATGGGACTGCGGGGAAACATT CTGTTCCAATTCTTAGGACCTCTCAAGGATTAGTGGTAATTCCAACGGCCACAACGAATTTGACGCTTGACAACTTCAGA CAAGCTTTAACACCCACCATGGATCCACAACAGGTAATTAGAAATCTGGAAGCAAGACCAGATAGAGATCTAGCAAGATT TTCAACTATACAGTTAGGATCGTTCTATCACAATCCTTTCGACTCGGCAGTCTCTAACAGGAATTGCACTGGAGAAGGAG AAGACAGAAGAGGTTCAGGAGAATTTCCAACTAGTGCATCTATAAATCAGTGTGTAAGCGGCAGATGCTCACTATCGCAA TAA
Upstream 100 bases:
>100_bases ATTTTCAACCGTCGAACTTATATTAATTTAGAGTATTACGATATACTTTATTTCAAAAAAGTATCGTTCTACAGTTCAAA TTTTATGAAAAAGAGGTAAA
Downstream 100 bases:
>100_bases AACACTGATTTAAAAGCCACATTATTATAACAGAAAAAGTCGTTGATGAGATAGAGTTATTCTATAAATACATTTCTACA TCAACGGCTGCACTCATAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 640; Mature: 640
Protein sequence:
>640_residues MKMYNWKKILIVVLLASIMVYLEYEMDHTLVHAASSSKTTNSIVQKPTDPPKDKPIKVNVSGGGTFCYGPNFSGGESYII IEQCWQMHVMNARYDVFQRISYNINNTWLCITAPETVVQGEEIWDYVHLRPCTINDPLQRWIIKDNSFWTANGFYRLKDT NWYGYISRNSGDKYNHTLDSSMKDWMNTIATPGNISILTSIAWDLNHSWGNERYFIRLGGSDKNTTPLYYNPENGHLAQY DPISGSLYCMYSQVDSYQWNWVSWESCSDAAISKDNPTYWNVSFETEEGGMITDYKGNALRVTRYGSNWGAAYAAKLSYL EKDTTNSPTSLFIVNKDLLDWTRYTTSNLGKTEQYCPAPGNQASTTHKRISRTLPPSFQLTEAWVQRLYEITRSTSGSDI SSGVCGVCLLHGFQMIAELQEYHSREPLQSGGYFFDTNPNTDPFISFGQRYPNLNTSLRDIVSTYGPTVRSSRRLILISA RTMLPQYEWSLSSESSTLSDMLSHIQSLIDSPPGSIWLVIMRRWRPDGTAGKHSVPILRTSQGLVVIPTATTNLTLDNFR QALTPTMDPQQVIRNLEARPDRDLARFSTIQLGSFYHNPFDSAVSNRNCTGEGEDRRGSGEFPTSASINQCVSGRCSLSQ
Sequences:
>Translated_640_residues MKMYNWKKILIVVLLASIMVYLEYEMDHTLVHAASSSKTTNSIVQKPTDPPKDKPIKVNVSGGGTFCYGPNFSGGESYII IEQCWQMHVMNARYDVFQRISYNINNTWLCITAPETVVQGEEIWDYVHLRPCTINDPLQRWIIKDNSFWTANGFYRLKDT NWYGYISRNSGDKYNHTLDSSMKDWMNTIATPGNISILTSIAWDLNHSWGNERYFIRLGGSDKNTTPLYYNPENGHLAQY DPISGSLYCMYSQVDSYQWNWVSWESCSDAAISKDNPTYWNVSFETEEGGMITDYKGNALRVTRYGSNWGAAYAAKLSYL EKDTTNSPTSLFIVNKDLLDWTRYTTSNLGKTEQYCPAPGNQASTTHKRISRTLPPSFQLTEAWVQRLYEITRSTSGSDI SSGVCGVCLLHGFQMIAELQEYHSREPLQSGGYFFDTNPNTDPFISFGQRYPNLNTSLRDIVSTYGPTVRSSRRLILISA RTMLPQYEWSLSSESSTLSDMLSHIQSLIDSPPGSIWLVIMRRWRPDGTAGKHSVPILRTSQGLVVIPTATTNLTLDNFR QALTPTMDPQQVIRNLEARPDRDLARFSTIQLGSFYHNPFDSAVSNRNCTGEGEDRRGSGEFPTSASINQCVSGRCSLSQ >Mature_640_residues MKMYNWKKILIVVLLASIMVYLEYEMDHTLVHAASSSKTTNSIVQKPTDPPKDKPIKVNVSGGGTFCYGPNFSGGESYII IEQCWQMHVMNARYDVFQRISYNINNTWLCITAPETVVQGEEIWDYVHLRPCTINDPLQRWIIKDNSFWTANGFYRLKDT NWYGYISRNSGDKYNHTLDSSMKDWMNTIATPGNISILTSIAWDLNHSWGNERYFIRLGGSDKNTTPLYYNPENGHLAQY DPISGSLYCMYSQVDSYQWNWVSWESCSDAAISKDNPTYWNVSFETEEGGMITDYKGNALRVTRYGSNWGAAYAAKLSYL EKDTTNSPTSLFIVNKDLLDWTRYTTSNLGKTEQYCPAPGNQASTTHKRISRTLPPSFQLTEAWVQRLYEITRSTSGSDI SSGVCGVCLLHGFQMIAELQEYHSREPLQSGGYFFDTNPNTDPFISFGQRYPNLNTSLRDIVSTYGPTVRSSRRLILISA RTMLPQYEWSLSSESSTLSDMLSHIQSLIDSPPGSIWLVIMRRWRPDGTAGKHSVPILRTSQGLVVIPTATTNLTLDNFR QALTPTMDPQQVIRNLEARPDRDLARFSTIQLGSFYHNPFDSAVSNRNCTGEGEDRRGSGEFPTSASINQCVSGRCSLSQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 72507; Mature: 72507
Theoretical pI: Translated: 6.82; Mature: 6.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKMYNWKKILIVVLLASIMVYLEYEMDHTLVHAASSSKTTNSIVQKPTDPPKDKPIKVNV CCCCCHHHHHHHHHHHHHHHHEEECCCCEEEEECCCCCCHHHHHCCCCCCCCCCCEEEEE SGGGTFCYGPNFSGGESYIIIEQCWQMHVMNARYDVFQRISYNINNTWLCITAPETVVQG CCCEEEEECCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHCC EEIWDYVHLRPCTINDPLQRWIIKDNSFWTANGFYRLKDTNWYGYISRNSGDKYNHTLDS HHHHHEEEEEECCCCCHHHHHEECCCCEEEECCEEEEECCCEEEEEECCCCCCCCCHHHH SMKDWMNTIATPGNISILTSIAWDLNHSWGNERYFIRLGGSDKNTTPLYYNPENGHLAQY HHHHHHHHHCCCCCEEEEEEEEEECCCCCCCCEEEEEECCCCCCCCCEEECCCCCCEEEE DPISGSLYCMYSQVDSYQWNWVSWESCSDAAISKDNPTYWNVSFETEEGGMITDYKGNAL CCCCCCEEEEEECCCCCEECEEECCCCCCCCCCCCCCCEEEEEEEECCCCEEEECCCCEE RVTRYGSNWGAAYAAKLSYLEKDTTNSPTSLFIVNKDLLDWTRYTTSNLGKTEQYCPAPG EEEEECCCCCHHHHHHHHHHHCCCCCCCCEEEEEECHHHHHHHHHHCCCCCCCCCCCCCC NQASTTHKRISRTLPPSFQLTEAWVQRLYEITRSTSGSDISSGVCGVCLLHGFQMIAELQ CCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH EYHSREPLQSGGYFFDTNPNTDPFISFGQRYPNLNTSLRDIVSTYGPTVRSSRRLILISA HHHCCCCHHCCCEEEECCCCCCHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCEEEEEEE RTMLPQYEWSLSSESSTLSDMLSHIQSLIDSPPGSIWLVIMRRWRPDGTAGKHSVPILRT HHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCEEEC SQGLVVIPTATTNLTLDNFRQALTPTMDPQQVIRNLEARPDRDLARFSTIQLGSFYHNPF CCCEEEEECCCCCCCHHHHHHHHCCCCCHHHHHHHCCCCCCCHHHHHHEEEECCHHCCCH DSAVSNRNCTGEGEDRRGSGEFPTSASINQCVSGRCSLSQ HHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCC >Mature Secondary Structure MKMYNWKKILIVVLLASIMVYLEYEMDHTLVHAASSSKTTNSIVQKPTDPPKDKPIKVNV CCCCCHHHHHHHHHHHHHHHHEEECCCCEEEEECCCCCCHHHHHCCCCCCCCCCCEEEEE SGGGTFCYGPNFSGGESYIIIEQCWQMHVMNARYDVFQRISYNINNTWLCITAPETVVQG CCCEEEEECCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHCC EEIWDYVHLRPCTINDPLQRWIIKDNSFWTANGFYRLKDTNWYGYISRNSGDKYNHTLDS HHHHHEEEEEECCCCCHHHHHEECCCCEEEECCEEEEECCCEEEEEECCCCCCCCCHHHH SMKDWMNTIATPGNISILTSIAWDLNHSWGNERYFIRLGGSDKNTTPLYYNPENGHLAQY HHHHHHHHHCCCCCEEEEEEEEEECCCCCCCCEEEEEECCCCCCCCCEEECCCCCCEEEE DPISGSLYCMYSQVDSYQWNWVSWESCSDAAISKDNPTYWNVSFETEEGGMITDYKGNAL CCCCCCEEEEEECCCCCEECEEECCCCCCCCCCCCCCCEEEEEEEECCCCEEEECCCCEE RVTRYGSNWGAAYAAKLSYLEKDTTNSPTSLFIVNKDLLDWTRYTTSNLGKTEQYCPAPG EEEEECCCCCHHHHHHHHHHHCCCCCCCCEEEEEECHHHHHHHHHHCCCCCCCCCCCCCC NQASTTHKRISRTLPPSFQLTEAWVQRLYEITRSTSGSDISSGVCGVCLLHGFQMIAELQ CCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH EYHSREPLQSGGYFFDTNPNTDPFISFGQRYPNLNTSLRDIVSTYGPTVRSSRRLILISA HHHCCCCHHCCCEEEECCCCCCHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCEEEEEEE RTMLPQYEWSLSSESSTLSDMLSHIQSLIDSPPGSIWLVIMRRWRPDGTAGKHSVPILRT HHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCEEEC SQGLVVIPTATTNLTLDNFRQALTPTMDPQQVIRNLEARPDRDLARFSTIQLGSFYHNPF CCCEEEEECCCCCCCHHHHHHHHCCCCCHHHHHHHCCCCCCCHHHHHHEEEECCHHCCCH DSAVSNRNCTGEGEDRRGSGEFPTSASINQCVSGRCSLSQ HHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA