| Definition | Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_005823 |
| Length | 4,277,185 |
Click here to switch to the map view.
The map label for this gene is 45656528
Identifier: 45656528
GI number: 45656528
Start: 769429
End: 769869
Strand: Reverse
Name: 45656528
Synonym: LIC10630
Alternate gene names: NA
Gene position: 769869-769429 (Counterclockwise)
Preceding gene: 45656536
Following gene: 45656527
Centisome position: 18.0
GC content: 34.92
Gene sequence:
>441_bases ATGAAAAATAAATGGGTAGTAGTAGCAAATAGGTCCGAGGCGAAAATTTTTGAATACAAAGGATCTAGAAAAGGTTTAGA ACTTTTAGAAAGTATTGAAAACCCAAAAGGAAGAATGAAAAATTCTGAATTGATCCCAAATTCTTCGGGCGGGAAACGAG CAAAAGCGCAAAGAATCGCCTTTGATTTCGATTCCGTTCAAGAACCAAAACGCAAAGTTGCAGAATCATTTGCCAGCCAA ATTTCGGACGTAATTTCCCAAGGAAGAAAATCAAATCGTTTTTTAAGCCTCGTTCTAGTTTCAGAACCTAGATTTCTCGG AATGCTCTTAGATAAGATGGATCGAAGATCTCAATCTATGATCTTTCATAAAATGGGAAAAGATATTATAACGACAAACA ATCAAGAGATTCTTTCTCATCTTCGAGAAATTCTTTTTTAA
Upstream 100 bases:
>100_bases TCGTTCTGAATGATGTTTTTAAGCCATTGTTAGAAAACGAAGACTTCAAACATCAACTCAGATAAAATTTTTCGGTAGAT TACTAGCGAGGAAAAGAAAT
Downstream 100 bases:
>100_bases CTTATGGTAGTTCCCACAAGTTAAGAGTTTGTTCCAAAAACTCAAAAAATTTTACGTGATAATTCTTTAGAAATTTTTAA TAACATGCAGTAGTTCCCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 146; Mature: 146
Protein sequence:
>146_residues MKNKWVVVANRSEAKIFEYKGSRKGLELLESIENPKGRMKNSELIPNSSGGKRAKAQRIAFDFDSVQEPKRKVAESFASQ ISDVISQGRKSNRFLSLVLVSEPRFLGMLLDKMDRRSQSMIFHKMGKDIITTNNQEILSHLREILF
Sequences:
>Translated_146_residues MKNKWVVVANRSEAKIFEYKGSRKGLELLESIENPKGRMKNSELIPNSSGGKRAKAQRIAFDFDSVQEPKRKVAESFASQ ISDVISQGRKSNRFLSLVLVSEPRFLGMLLDKMDRRSQSMIFHKMGKDIITTNNQEILSHLREILF >Mature_146_residues MKNKWVVVANRSEAKIFEYKGSRKGLELLESIENPKGRMKNSELIPNSSGGKRAKAQRIAFDFDSVQEPKRKVAESFASQ ISDVISQGRKSNRFLSLVLVSEPRFLGMLLDKMDRRSQSMIFHKMGKDIITTNNQEILSHLREILF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16730; Mature: 16730
Theoretical pI: Translated: 10.85; Mature: 10.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNKWVVVANRSEAKIFEYKGSRKGLELLESIENPKGRMKNSELIPNSSGGKRAKAQRIA CCCCEEEEECCCCCEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHH FDFDSVQEPKRKVAESFASQISDVISQGRKSNRFLSLVLVSEPRFLGMLLDKMDRRSQSM CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHH IFHKMGKDIITTNNQEILSHLREILF HHHHHCCHHCCCCCHHHHHHHHHHHC >Mature Secondary Structure MKNKWVVVANRSEAKIFEYKGSRKGLELLESIENPKGRMKNSELIPNSSGGKRAKAQRIA CCCCEEEEECCCCCEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHH FDFDSVQEPKRKVAESFASQISDVISQGRKSNRFLSLVLVSEPRFLGMLLDKMDRRSQSM CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHH IFHKMGKDIITTNNQEILSHLREILF HHHHHCCHHCCCCCHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA