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The map label for this gene is 45656524

Identifier: 45656524

GI number: 45656524

Start: 764267

End: 764605

Strand: Reverse

Name: 45656524

Synonym: LIC10626

Alternate gene names: NA

Gene position: 764605-764267 (Counterclockwise)

Preceding gene: 45656525

Following gene: 45656516

Centisome position: 17.88

GC content: 38.05

Gene sequence:

>339_bases
ATGTCCGAAGACTTTAGAATTTTCGTAGATTTAGCCGTTTCTGTTCCGATCATCCATATCGAAGGAGAAATTACTTCGGA
AGCAGACGAAACAATCCTAGAAAAATACGAATCCATTCCTGAAGGAAAACGGGATCGTGTCATTCTAAATTTCCAAGGTA
CCTCCTACATCAATTCAGCGGGTATTGCAACTCTTATCAGTTTAATTACAAAAGCTTCCGAAGCAAAAAGAAAAATCGAA
TTTGCAGGTCTGAACGAACATTTCAGAAAAGTGATGGATATAGTAGGATTGGCTGACTTCGTTCTGATTCACAACTCTCT
CCAAGAAGCACTTAAATAA

Upstream 100 bases:

>100_bases
CGGAAGACAATTTGATCAATTGTCTCCTACTGAGCTTGGAAATTACGCGTAATTCGATTGACTTTCATAGAATTGAAAGG
TTTTTTGTTTTAAGATTTTT

Downstream 100 bases:

>100_bases
AACAAAAACTTTACTTAAGGCATTTCTTATAGAGTCCGGCTCTACCTTTCACACCGTTAAATCAAACACGCATTTTTTAC
ATTTAGATTCGAAAAAATTC

Product: anti-sigma factor antagonist

Products: NA

Alternate protein names: Anti-Sigma Factor Antagonist; Anti-Anti-Sigma Factor

Number of amino acids: Translated: 112; Mature: 111

Protein sequence:

>112_residues
MSEDFRIFVDLAVSVPIIHIEGEITSEADETILEKYESIPEGKRDRVILNFQGTSYINSAGIATLISLITKASEAKRKIE
FAGLNEHFRKVMDIVGLADFVLIHNSLQEALK

Sequences:

>Translated_112_residues
MSEDFRIFVDLAVSVPIIHIEGEITSEADETILEKYESIPEGKRDRVILNFQGTSYINSAGIATLISLITKASEAKRKIE
FAGLNEHFRKVMDIVGLADFVLIHNSLQEALK
>Mature_111_residues
SEDFRIFVDLAVSVPIIHIEGEITSEADETILEKYESIPEGKRDRVILNFQGTSYINSAGIATLISLITKASEAKRKIEF
AGLNEHFRKVMDIVGLADFVLIHNSLQEALK

Specific function: Unknown

COG id: COG1366

COG function: function code T; Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12521; Mature: 12389

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: PS50801 STAS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEDFRIFVDLAVSVPIIHIEGEITSEADETILEKYESIPEGKRDRVILNFQGTSYINSA
CCCCCEEEEEEECCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHH
GIATLISLITKASEAKRKIEFAGLNEHFRKVMDIVGLADFVLIHNSLQEALK
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SEDFRIFVDLAVSVPIIHIEGEITSEADETILEKYESIPEGKRDRVILNFQGTSYINSA
CCCCEEEEEEECCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHH
GIATLISLITKASEAKRKIEFAGLNEHFRKVMDIVGLADFVLIHNSLQEALK
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA