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The map label for this gene is smf [H]

Identifier: 45656514

GI number: 45656514

Start: 754189

End: 755172

Strand: Direct

Name: smf [H]

Synonym: LIC10616

Alternate gene names: 45656514

Gene position: 754189-755172 (Clockwise)

Preceding gene: 45656513

Following gene: 45656515

Centisome position: 17.63

GC content: 36.79

Gene sequence:

>984_bases
ATGAATCGACTTGTTCTAGTCGATTCCCAGGTTTCTAAATTCTGTTTTAAAAATCAAATATTCAGAAAATTGAATTCTTG
GGAAAGTTTAAACGAATATTTAAAAAACCATCTTCCCGCCTCTGTTCTGGGAAAATCCTTGTTTCACTCGGATAAAATTT
CTAAAGATTTGGACTTAACCGGATTTAAAGTCTTGTCTTTTTATGATCCGCAATATCCGTCTCTTTTAAAGGAAATTTAT
GATCCACCTTTGGTTTTATTTTATAAAGGAAATTTGAATATTCTAAATTTATTATATGGGGCGGTAGTAGGCACCAGGGA
TCCTTCCCCAATTTCGGTTTTTGCCGCGGAGTTATTTCCTTCTTACTTAAAAAATAAAGGTTTTTCTGGAATTGTTTCGG
GTTTTGCCAAAGGAATAGACGCTGTGAGTATGAACTCTGCTCTTGACGAAGATTTGGCGGTCATAGGAGTGATGGGAACC
GGTCCGGAAAAAGAATATCCTTTCGAAAATAAAATGTTATACCAAAGGATAAATTCTTCCCAACGGACTTTAATTTTAAC
CGAATATCCTCCCGGTCAAAAAATTTTAAAATACACGTTTCCAAAACGAAATCGAATTATCACTGGGCTTTGTAGTTCCG
TTTTTATCGTAGAAGCTCCTGAAAAATCGGGGGCAATTTCATCCGCTTATAATGCTATAGAACAAAATAGAAATGTTTTT
ATCTTTTCGGATCCTCGTCAGACCAAAAATTTTGGCGGGGAAATTTTAATTCGAGAAGGGGCGGAAATCCTAAATCTAAA
AGACATCTCTTTGGGAATGAAAGAAGTGTTTCACATGAATGATCTTTTGCCGGATTCGCAATCGAAAATTCCGGGAATGC
TTGCAGAACTTTCCAAGAAACGCTTTTCTGGCGAATGGAAACCGATCGGCGCTGGTTACTATGCGAGAAAAACTTATTTC
CAACCTATTCTTCCGGGTTTCTAA

Upstream 100 bases:

>100_bases
ACGATGCGGGTCTGGTTCGAGGTGGACTTGAAAAAAACGATTCGTATCAAAATGTACTTCAAAATTTGAAAAAAATAGAA
GAAACTTACTCAAGATCGGA

Downstream 100 bases:

>100_bases
TCCTCTTCCCGCTTGGTCTTTGGGATTTTATCGGATTGTATTCGGTATTCTTCTTTTTATATTAGCATTTCGTTATTTTT
CAAATGGATGGATTTCCAAA

Product: DNA processing chain A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 327; Mature: 327

Protein sequence:

>327_residues
MNRLVLVDSQVSKFCFKNQIFRKLNSWESLNEYLKNHLPASVLGKSLFHSDKISKDLDLTGFKVLSFYDPQYPSLLKEIY
DPPLVLFYKGNLNILNLLYGAVVGTRDPSPISVFAAELFPSYLKNKGFSGIVSGFAKGIDAVSMNSALDEDLAVIGVMGT
GPEKEYPFENKMLYQRINSSQRTLILTEYPPGQKILKYTFPKRNRIITGLCSSVFIVEAPEKSGAISSAYNAIEQNRNVF
IFSDPRQTKNFGGEILIREGAEILNLKDISLGMKEVFHMNDLLPDSQSKIPGMLAELSKKRFSGEWKPIGAGYYARKTYF
QPILPGF

Sequences:

>Translated_327_residues
MNRLVLVDSQVSKFCFKNQIFRKLNSWESLNEYLKNHLPASVLGKSLFHSDKISKDLDLTGFKVLSFYDPQYPSLLKEIY
DPPLVLFYKGNLNILNLLYGAVVGTRDPSPISVFAAELFPSYLKNKGFSGIVSGFAKGIDAVSMNSALDEDLAVIGVMGT
GPEKEYPFENKMLYQRINSSQRTLILTEYPPGQKILKYTFPKRNRIITGLCSSVFIVEAPEKSGAISSAYNAIEQNRNVF
IFSDPRQTKNFGGEILIREGAEILNLKDISLGMKEVFHMNDLLPDSQSKIPGMLAELSKKRFSGEWKPIGAGYYARKTYF
QPILPGF
>Mature_327_residues
MNRLVLVDSQVSKFCFKNQIFRKLNSWESLNEYLKNHLPASVLGKSLFHSDKISKDLDLTGFKVLSFYDPQYPSLLKEIY
DPPLVLFYKGNLNILNLLYGAVVGTRDPSPISVFAAELFPSYLKNKGFSGIVSGFAKGIDAVSMNSALDEDLAVIGVMGT
GPEKEYPFENKMLYQRINSSQRTLILTEYPPGQKILKYTFPKRNRIITGLCSSVFIVEAPEKSGAISSAYNAIEQNRNVF
IFSDPRQTKNFGGEILIREGAEILNLKDISLGMKEVFHMNDLLPDSQSKIPGMLAELSKKRFSGEWKPIGAGYYARKTYF
QPILPGF

Specific function: Unknown

COG id: COG0758

COG function: function code LU; Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the smf family [H]

Homologues:

Organism=Escherichia coli, GI48994932, Length=193, Percent_Identity=36.7875647668394, Blast_Score=103, Evalue=2e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003488 [H]

Pfam domain/function: PF02481 DNA_processg_A [H]

EC number: NA

Molecular weight: Translated: 36744; Mature: 36744

Theoretical pI: Translated: 9.50; Mature: 9.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRLVLVDSQVSKFCFKNQIFRKLNSWESLNEYLKNHLPASVLGKSLFHSDKISKDLDLT
CCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCC
GFKVLSFYDPQYPSLLKEIYDPPLVLFYKGNLNILNLLYGAVVGTRDPSPISVFAAELFP
CEEEEEECCCCHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHCCCCCCCHHHHHHHHHH
SYLKNKGFSGIVSGFAKGIDAVSMNSALDEDLAVIGVMGTGPEKEYPFENKMLYQRINSS
HHHHCCCCHHHHHHHHHCCCHHHHHHHHCCCEEEEEEECCCCCCCCCCHHHHHHHHHCCC
QRTLILTEYPPGQKILKYTFPKRNRIITGLCSSVFIVEAPEKSGAISSAYNAIEQNRNVF
CCEEEEEECCCCCHHHEECCCCCCCCHHHHHCCEEEEECCCCCCCHHHHHHHHHCCCCEE
IFSDPRQTKNFGGEILIREGAEILNLKDISLGMKEVFHMNDLLPDSQSKIPGMLAELSKK
EEECCHHHHCCCCEEEEECCCCCEEEHHHHHHHHHHHHHHHCCCCCCHHCHHHHHHHHHH
RFSGEWKPIGAGYYARKTYFQPILPGF
HHCCCCCCCCCCHHHHHHHHCCCCCCC
>Mature Secondary Structure
MNRLVLVDSQVSKFCFKNQIFRKLNSWESLNEYLKNHLPASVLGKSLFHSDKISKDLDLT
CCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCC
GFKVLSFYDPQYPSLLKEIYDPPLVLFYKGNLNILNLLYGAVVGTRDPSPISVFAAELFP
CEEEEEECCCCHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHCCCCCCCHHHHHHHHHH
SYLKNKGFSGIVSGFAKGIDAVSMNSALDEDLAVIGVMGTGPEKEYPFENKMLYQRINSS
HHHHCCCCHHHHHHHHHCCCHHHHHHHHCCCEEEEEEECCCCCCCCCCHHHHHHHHHCCC
QRTLILTEYPPGQKILKYTFPKRNRIITGLCSSVFIVEAPEKSGAISSAYNAIEQNRNVF
CCEEEEEECCCCCHHHEECCCCCCCCHHHHHCCEEEEECCCCCCCHHHHHHHHHCCCCEE
IFSDPRQTKNFGGEILIREGAEILNLKDISLGMKEVFHMNDLLPDSQSKIPGMLAELSKK
EEECCHHHHCCCCEEEEECCCCCEEEHHHHHHHHHHHHHHHCCCCCCHHCHHHHHHHHHH
RFSGEWKPIGAGYYARKTYFQPILPGF
HHCCCCCCCCCCHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]