Click here to switch to the map view.

The map label for this gene is 45656498

Identifier: 45656498

GI number: 45656498

Start: 733931

End: 734347

Strand: Reverse

Name: 45656498

Synonym: LIC10600

Alternate gene names: NA

Gene position: 734347-733931 (Counterclockwise)

Preceding gene: 45656499

Following gene: 45656497

Centisome position: 17.17

GC content: 39.09

Gene sequence:

>417_bases
ATGAGTAAAATTGAATATGATAAAATGGAAGTGGGACAAGAACTTCCTCCTTTAAAAACAGAAGTAATCACACACGCAAA
TTTAGTACGTTATGCAGGAGCTTCTGGGGATTTTAATCCAATTCACAATGATCCTGATTTTGCTCGTAAAACTGGATTAG
ATGGAACGATCGCACACGGTATGTATGTAATGGCCCAACTTGGAAGACTTTGCACTTCTTGGGCGGATCAAAAACAGATC
AAAGAATTTGGTGTTACGTTTAAAAACATGACCAAACCGGGACAAAAACTTACCTGCACCGGAAAGGTAAAACGTAAAAA
GGAAGAAAACGGAGAGAAATTAATTACAGTTGCAGTGGAAGCTACAGACGATTCCGGAGAAGTAAAATGTTCCGGTGAAA
TGGTGGTTGTCGCTTAA

Upstream 100 bases:

>100_bases
ATGGATACGATGACTTTTAAAACTACGATCAAAAACGCGAAAGGTGAAACAATCGTAGAACAGGAAATGTCCATCTTTAT
CAGAAAACCAGAGGCATAAT

Downstream 100 bases:

>100_bases
CAAACATTACAACTCTTCGAAATTCGAAATCGAAAAAACGACATTCGATTTCGAGAAAGTCCTTCATTTACTCTATTTAA
CATGAGTTCGGTATAGCCGA

Product: fatty acid synthase subunit beta

Products: NA

Alternate protein names: Dehydratase; MaoC-Like Dehydratase; MaoC Domain-Containing Protein Dehydratase; Acyl Dehydratase; MaoC Family Protein; (3R)-Hydroxyacyl-ACP Dehydratase Subunit HadB; MaoC Domain-Containing Protein; MaoC-Like Domain-Containing Protein; Dehydrogenase; MaoC Like Domain-Containing Protein; MaoC-Like Domain-Containing; Maoc-Like Dehydratase; Fatty Acid Synthase Subunit Beta; R_hydratase_like -Hydratase

Number of amino acids: Translated: 138; Mature: 137

Protein sequence:

>138_residues
MSKIEYDKMEVGQELPPLKTEVITHANLVRYAGASGDFNPIHNDPDFARKTGLDGTIAHGMYVMAQLGRLCTSWADQKQI
KEFGVTFKNMTKPGQKLTCTGKVKRKKEENGEKLITVAVEATDDSGEVKCSGEMVVVA

Sequences:

>Translated_138_residues
MSKIEYDKMEVGQELPPLKTEVITHANLVRYAGASGDFNPIHNDPDFARKTGLDGTIAHGMYVMAQLGRLCTSWADQKQI
KEFGVTFKNMTKPGQKLTCTGKVKRKKEENGEKLITVAVEATDDSGEVKCSGEMVVVA
>Mature_137_residues
SKIEYDKMEVGQELPPLKTEVITHANLVRYAGASGDFNPIHNDPDFARKTGLDGTIAHGMYVMAQLGRLCTSWADQKQIK
EFGVTFKNMTKPGQKLTCTGKVKRKKEENGEKLITVAVEATDDSGEVKCSGEMVVVA

Specific function: Unknown

COG id: COG2030

COG function: function code I; Acyl dehydratase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15150; Mature: 15018

Theoretical pI: Translated: 7.44; Mature: 7.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKIEYDKMEVGQELPPLKTEVITHANLVRYAGASGDFNPIHNDPDFARKTGLDGTIAHG
CCCCCCHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCHHHHH
MYVMAQLGRLCTSWADQKQIKEFGVTFKNMTKPGQKLTCTGKVKRKKEENGEKLITVAVE
HHHHHHHHHHHHHHCCHHHHHHHCCCHHHCCCCCCEEEECCCCHHCCCCCCCEEEEEEEE
ATDDSGEVKCSGEMVVVA
ECCCCCCEEECCCEEEEC
>Mature Secondary Structure 
SKIEYDKMEVGQELPPLKTEVITHANLVRYAGASGDFNPIHNDPDFARKTGLDGTIAHG
CCCCCHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCHHHHH
MYVMAQLGRLCTSWADQKQIKEFGVTFKNMTKPGQKLTCTGKVKRKKEENGEKLITVAVE
HHHHHHHHHHHHHHCCHHHHHHHCCCHHHCCCCCCEEEECCCCHHCCCCCCCEEEEEEEE
ATDDSGEVKCSGEMVVVA
ECCCCCCEEECCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA