Click here to switch to the map view.

The map label for this gene is 45656407

Identifier: 45656407

GI number: 45656407

Start: 606359

End: 606967

Strand: Direct

Name: 45656407

Synonym: LIC10509

Alternate gene names: NA

Gene position: 606359-606967 (Clockwise)

Preceding gene: 45656406

Following gene: 45656408

Centisome position: 14.18

GC content: 34.32

Gene sequence:

>609_bases
ATGAACAAAATTAAAATTGTAACAGTTATTACTTTGTTTTTGATTTCTTTAAATGGCTGTAAAAAGAGCAAAGAAGAATT
GGAAAAAGAACTAGATAGTCAAAAAGATAAACTTATTTCAGAATCTATAAATTCAGTATATCAACTTGGTAGTAATGGTT
TTGCTTTTCTAATTGATCCCTCTAATGTTAGGAGTTTTGATAGTGCATGTTTAGATTTCAAACCGAGTGAAGGCTTTGCA
TTGGTGAAGTTTTACAAAAATGCAAAAACTTATAAAATGCAAGTTAAAACCAAAACTCTAAGAGAATACATTTTTAATTA
TGAAGGAAAAGAAGGTATTGTTCAACTAAATCTCTGGGGGGAGTTTCCTGTAAGAGAAGGTACAATGGATATGCTGACTG
CTAAAGCTAATATGGTAATACCAAGTGATCCAAAATCGTCTGGGGAAATTGGTCGAATAGATCTTGCGTATGGAAATGAG
AGTATTGCCAAAGCCCGTCATGGTCGTTTTAAGACATTAGAAGAGTGTGAAGCTCAATATGCTGCGGATGAAGAGCTAAG
CGAAACACTTCGTAAACAAGATGGAGCATGCGAAGGTCCTGGCTGTTAG

Upstream 100 bases:

>100_bases
GGCTCAAATATCTGCGGATGAAGAACTAAGCGAAACACTTCGTAAACAAGATGGAGCATGTGAAGGTCCTGGTTGTTAGT
AACGCAACAAAGTAATAGTT

Downstream 100 bases:

>100_bases
TAACAAATAAAAGAAGAATTGTCTTAGTCGGAAAACCTTCCGTATTTAGCTAGTATTCTCGTAATATGTAACCCTCAAAA
AGGCCCACTTTTTAAAGAAG

Product: putative lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 202; Mature: 202

Protein sequence:

>202_residues
MNKIKIVTVITLFLISLNGCKKSKEELEKELDSQKDKLISESINSVYQLGSNGFAFLIDPSNVRSFDSACLDFKPSEGFA
LVKFYKNAKTYKMQVKTKTLREYIFNYEGKEGIVQLNLWGEFPVREGTMDMLTAKANMVIPSDPKSSGEIGRIDLAYGNE
SIAKARHGRFKTLEECEAQYAADEELSETLRKQDGACEGPGC

Sequences:

>Translated_202_residues
MNKIKIVTVITLFLISLNGCKKSKEELEKELDSQKDKLISESINSVYQLGSNGFAFLIDPSNVRSFDSACLDFKPSEGFA
LVKFYKNAKTYKMQVKTKTLREYIFNYEGKEGIVQLNLWGEFPVREGTMDMLTAKANMVIPSDPKSSGEIGRIDLAYGNE
SIAKARHGRFKTLEECEAQYAADEELSETLRKQDGACEGPGC
>Mature_202_residues
MNKIKIVTVITLFLISLNGCKKSKEELEKELDSQKDKLISESINSVYQLGSNGFAFLIDPSNVRSFDSACLDFKPSEGFA
LVKFYKNAKTYKMQVKTKTLREYIFNYEGKEGIVQLNLWGEFPVREGTMDMLTAKANMVIPSDPKSSGEIGRIDLAYGNE
SIAKARHGRFKTLEECEAQYAADEELSETLRKQDGACEGPGC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22621; Mature: 22621

Theoretical pI: Translated: 5.47; Mature: 5.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKIKIVTVITLFLISLNGCKKSKEELEKELDSQKDKLISESINSVYQLGSNGFAFLIDP
CCCEEHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECC
SNVRSFDSACLDFKPSEGFALVKFYKNAKTYKMQVKTKTLREYIFNYEGKEGIVQLNLWG
CCCCHHHHHHCCCCCCCCEEEEEEECCCCEEEEEHHHHHHHHHHHCCCCCCCEEEEEECC
EFPVREGTMDMLTAKANMVIPSDPKSSGEIGRIDLAYGNESIAKARHGRFKTLEECEAQY
CCCCCCCCHHHHHHCCCEEECCCCCCCCCEEEEEEEECCHHHHHHHCCCCCCHHHHHHHH
AADEELSETLRKQDGACEGPGC
CCHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MNKIKIVTVITLFLISLNGCKKSKEELEKELDSQKDKLISESINSVYQLGSNGFAFLIDP
CCCEEHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECC
SNVRSFDSACLDFKPSEGFALVKFYKNAKTYKMQVKTKTLREYIFNYEGKEGIVQLNLWG
CCCCHHHHHHCCCCCCCCEEEEEEECCCCEEEEEHHHHHHHHHHHCCCCCCCEEEEEECC
EFPVREGTMDMLTAKANMVIPSDPKSSGEIGRIDLAYGNESIAKARHGRFKTLEECEAQY
CCCCCCCCHHHHHHCCCEEECCCCCCCCCEEEEEEEECCHHHHHHHCCCCCCHHHHHHHH
AADEELSETLRKQDGACEGPGC
CCHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA