Click here to switch to the map view.

The map label for this gene is 45656406

Identifier: 45656406

GI number: 45656406

Start: 605726

End: 606337

Strand: Direct

Name: 45656406

Synonym: LIC10508

Alternate gene names: NA

Gene position: 605726-606337 (Clockwise)

Preceding gene: 45656405

Following gene: 45656407

Centisome position: 14.16

GC content: 33.01

Gene sequence:

>612_bases
ATGAAGAAGATTAAAATTGTAACAGTTATTACTTTGTTTCTGATTTCTTTAACTGGTTGTAAAAAGAGCAAAGAAGAAAT
TGAAAGAGAAAAGAAAGAAAGTTTAAAAAAAGACGTTCTTAATTCAATAACTATGGTTTATGAGATGGGCGGCGGCTCTA
CTTTTGCTCTTTTGGTTGATCCAGAGAATTATAAAAAGGTTGCTTGGGCTTGTTTAGATTTCAAACCTAATGAAAATCGA
GCAATTATAAAATATTATAATTTTCCTAATCGTTATGAAGTTCGTGTTGAAGCTATTAATGAGTTAGAATACAAATTAAA
TTACAGCGATCGAGAAGCCAGTATGAAATTAGAAGTAACAGGTGATTATCCTGTAAAAGAAGGTTCTATGGGATTTTTAA
CTTCGACTGTTTCTCTTTCTTTTAAGGGTGATTCTAAAGTATATAATGATGTTGGTAGAATGGATTTAATCTACGGTAGT
GATAGTGTAGCGAGATCGCGTCATGGTCGTTTTAAAACATTAGAAGAATGTGAGGCTCAAATATCTGCGGATGAAGAACT
AAGCGAAACACTTCGTAAACAAGATGGAGCATGTGAAGGTCCTGGTTGTTAG

Upstream 100 bases:

>100_bases
AGAGGGATATGTTAAGAACGATGAATTAAATGAGTCCTTGCGAGAACAAAAGTCTACGTGCGAAGGTCCTGGCTGTTAGT
AACGCAACAAAGTAATAGTT

Downstream 100 bases:

>100_bases
TAACGCAACAAAGTAATAGTTATGAACAAAATTAAAATTGTAACAGTTATTACTTTGTTTTTGATTTCTTTAAATGGCTG
TAAAAAGAGCAAAGAAGAAT

Product: putative lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 203; Mature: 203

Protein sequence:

>203_residues
MKKIKIVTVITLFLISLTGCKKSKEEIEREKKESLKKDVLNSITMVYEMGGGSTFALLVDPENYKKVAWACLDFKPNENR
AIIKYYNFPNRYEVRVEAINELEYKLNYSDREASMKLEVTGDYPVKEGSMGFLTSTVSLSFKGDSKVYNDVGRMDLIYGS
DSVARSRHGRFKTLEECEAQISADEELSETLRKQDGACEGPGC

Sequences:

>Translated_203_residues
MKKIKIVTVITLFLISLTGCKKSKEEIEREKKESLKKDVLNSITMVYEMGGGSTFALLVDPENYKKVAWACLDFKPNENR
AIIKYYNFPNRYEVRVEAINELEYKLNYSDREASMKLEVTGDYPVKEGSMGFLTSTVSLSFKGDSKVYNDVGRMDLIYGS
DSVARSRHGRFKTLEECEAQISADEELSETLRKQDGACEGPGC
>Mature_203_residues
MKKIKIVTVITLFLISLTGCKKSKEEIEREKKESLKKDVLNSITMVYEMGGGSTFALLVDPENYKKVAWACLDFKPNENR
AIIKYYNFPNRYEVRVEAINELEYKLNYSDREASMKLEVTGDYPVKEGSMGFLTSTVSLSFKGDSKVYNDVGRMDLIYGS
DSVARSRHGRFKTLEECEAQISADEELSETLRKQDGACEGPGC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22992; Mature: 22992

Theoretical pI: Translated: 5.51; Mature: 5.51

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIKIVTVITLFLISLTGCKKSKEEIEREKKESLKKDVLNSITMVYEMGGGSTFALLVD
CCEEEHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEECCCCEEEEEEC
PENYKKVAWACLDFKPNENRAIIKYYNFPNRYEVRVEAINELEYKLNYSDREASMKLEVT
CCCCCEEEEEEEECCCCCCEEEEEEECCCCEEEEEEEEECCEEEEECCCCCCCEEEEEEE
GDYPVKEGSMGFLTSTVSLSFKGDSKVYNDVGRMDLIYGSDSVARSRHGRFKTLEECEAQ
CCCCCCCCCCEEEEEEEEEEECCCCHHHHCCCCEEEEECCCHHHHHCCCCCCCHHHHHHH
ISADEELSETLRKQDGACEGPGC
CCCCHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MKKIKIVTVITLFLISLTGCKKSKEEIEREKKESLKKDVLNSITMVYEMGGGSTFALLVD
CCEEEHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEECCCCEEEEEEC
PENYKKVAWACLDFKPNENRAIIKYYNFPNRYEVRVEAINELEYKLNYSDREASMKLEVT
CCCCCEEEEEEEECCCCCCEEEEEEECCCCEEEEEEEEECCEEEEECCCCCCCEEEEEEE
GDYPVKEGSMGFLTSTVSLSFKGDSKVYNDVGRMDLIYGSDSVARSRHGRFKTLEECEAQ
CCCCCCCCCCEEEEEEEEEEECCCCHHHHCCCCEEEEECCCHHHHHCCCCCCCHHHHHHH
ISADEELSETLRKQDGACEGPGC
CCCCHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA