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The map label for this gene is 45656325

Identifier: 45656325

GI number: 45656325

Start: 486553

End: 487497

Strand: Direct

Name: 45656325

Synonym: LIC10425

Alternate gene names: NA

Gene position: 486553-487497 (Clockwise)

Preceding gene: 45656321

Following gene: 45656326

Centisome position: 11.38

GC content: 35.24

Gene sequence:

>945_bases
GTGAATCCAAGTACAGTTCGACTGAATTTTAAATTGAATCTGATTCGCCATCTTCGAGATGGTAAACGAATGACTCTCGA
AGAACTTGCCAGTGTGACCGGAATCAACAATCAAAAAGATTTAAAAGAACAATTGGGAGAACTTTTTTTTCTGGGGGCAA
CTCCTCACGTCGCCGATTTGATCCAAGTCGATTATGATTCAGAAACGGATACATTTGGTTTGATTTTACCTTTTCGTTTT
GATTCTAGTTTACGTTTGAGTATTCGAGAATGGCTAACACTTAGAAAAATTTTAGAAGAAGTTGTAGAAGCCAGCTCCGA
TCCAAAAACAAATTCAACTGCTCGTAAAATACTTCAGAAAATCATTTCTATTGTTCCCATTGCTGGCCAGGAAGCACTTT
CGGTTTACAAAACTAATATTCAAAATGCGATTCAAAACGAAAAATCTTTAATCCTGGAATATCAATCCAGAATGGGCGAA
AAATCTACTCTTAGAAAAGTAGATCCTTGGTTTTTATTTCATTCATTAGAAGATTATTTATTAGGATATTGTCATGAACG
AAAGGCGCCTCGAAATTTTCGCTTGGACAATATTCTTTCCTTAAAAATTGGTTCGGACCCGATCTTGCAACCAGCTGGTC
AAAAAAAATCAGATTATATTCGAGAATTTGAAGAATTTCGTAAAAGTTGGGAGAATTCATCCGGAATCGCAGAAATTTGG
CATACTCGGGAAGTGTTTTATAATCTCAATCGTAAACTTGATTTGGAAAGAACCGAAAAAACTCAAAAATTGGATAATGT
CGTTTATCATTTATCCAAAGCCAAAATTCGGGAAGAAAACTGGTTTTTGGAAACAATTCTTCCATTTGGAAAAAATGTAA
TTTTGGAACGTCCTACTCATTTGGCAAAGCGGATTCTGAGAGAATTAGAATCGATTCTTCATTAG

Upstream 100 bases:

>100_bases
AAAATTTATGTCTGCGAGAAGTTGTTTGATTTGGAATGTTCGAAACCAAGATTCTTACATTTCCGGTTTACAGAATGTGT
GCCATTTTTACATTTGAGGT

Downstream 100 bases:

>100_bases
ATACGATCGTGCCAATGTTTTTTAAAAAATATTAGAAAAACATGAAATTTAAAAATTTTTATGTTTTTATTTCAGATTAT
TTTTTACTAGTTTCGAAATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 314; Mature: 314

Protein sequence:

>314_residues
MNPSTVRLNFKLNLIRHLRDGKRMTLEELASVTGINNQKDLKEQLGELFFLGATPHVADLIQVDYDSETDTFGLILPFRF
DSSLRLSIREWLTLRKILEEVVEASSDPKTNSTARKILQKIISIVPIAGQEALSVYKTNIQNAIQNEKSLILEYQSRMGE
KSTLRKVDPWFLFHSLEDYLLGYCHERKAPRNFRLDNILSLKIGSDPILQPAGQKKSDYIREFEEFRKSWENSSGIAEIW
HTREVFYNLNRKLDLERTEKTQKLDNVVYHLSKAKIREENWFLETILPFGKNVILERPTHLAKRILRELESILH

Sequences:

>Translated_314_residues
MNPSTVRLNFKLNLIRHLRDGKRMTLEELASVTGINNQKDLKEQLGELFFLGATPHVADLIQVDYDSETDTFGLILPFRF
DSSLRLSIREWLTLRKILEEVVEASSDPKTNSTARKILQKIISIVPIAGQEALSVYKTNIQNAIQNEKSLILEYQSRMGE
KSTLRKVDPWFLFHSLEDYLLGYCHERKAPRNFRLDNILSLKIGSDPILQPAGQKKSDYIREFEEFRKSWENSSGIAEIW
HTREVFYNLNRKLDLERTEKTQKLDNVVYHLSKAKIREENWFLETILPFGKNVILERPTHLAKRILRELESILH
>Mature_314_residues
MNPSTVRLNFKLNLIRHLRDGKRMTLEELASVTGINNQKDLKEQLGELFFLGATPHVADLIQVDYDSETDTFGLILPFRF
DSSLRLSIREWLTLRKILEEVVEASSDPKTNSTARKILQKIISIVPIAGQEALSVYKTNIQNAIQNEKSLILEYQSRMGE
KSTLRKVDPWFLFHSLEDYLLGYCHERKAPRNFRLDNILSLKIGSDPILQPAGQKKSDYIREFEEFRKSWENSSGIAEIW
HTREVFYNLNRKLDLERTEKTQKLDNVVYHLSKAKIREENWFLETILPFGKNVILERPTHLAKRILRELESILH

Specific function: Unknown

COG id: COG2378

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36679; Mature: 36679

Theoretical pI: Translated: 9.17; Mature: 9.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPSTVRLNFKLNLIRHLRDGKRMTLEELASVTGINNQKDLKEQLGELFFLGATPHVADL
CCCCEEEEEEEHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHHEEEECCCCHHHHH
IQVDYDSETDTFGLILPFRFDSSLRLSIREWLTLRKILEEVVEASSDPKTNSTARKILQK
HHCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
IISIVPIAGQEALSVYKTNIQNAIQNEKSLILEYQSRMGEKSTLRKVDPWFLFHSLEDYL
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHH
LGYCHERKAPRNFRLDNILSLKIGSDPILQPAGQKKSDYIREFEEFRKSWENSSGIAEIW
HHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHH
HTREVFYNLNRKLDLERTEKTQKLDNVVYHLSKAKIREENWFLETILPFGKNVILERPTH
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHH
LAKRILRELESILH
HHHHHHHHHHHHHC
>Mature Secondary Structure
MNPSTVRLNFKLNLIRHLRDGKRMTLEELASVTGINNQKDLKEQLGELFFLGATPHVADL
CCCCEEEEEEEHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHHEEEECCCCHHHHH
IQVDYDSETDTFGLILPFRFDSSLRLSIREWLTLRKILEEVVEASSDPKTNSTARKILQK
HHCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
IISIVPIAGQEALSVYKTNIQNAIQNEKSLILEYQSRMGEKSTLRKVDPWFLFHSLEDYL
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHH
LGYCHERKAPRNFRLDNILSLKIGSDPILQPAGQKKSDYIREFEEFRKSWENSSGIAEIW
HHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHH
HTREVFYNLNRKLDLERTEKTQKLDNVVYHLSKAKIREENWFLETILPFGKNVILERPTH
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHH
LAKRILRELESILH
HHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA