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The map label for this gene is 45656224

Identifier: 45656224

GI number: 45656224

Start: 364235

End: 364837

Strand: Reverse

Name: 45656224

Synonym: LIC10320

Alternate gene names: NA

Gene position: 364837-364235 (Counterclockwise)

Preceding gene: 45656225

Following gene: 45656223

Centisome position: 8.53

GC content: 33.83

Gene sequence:

>603_bases
ATGTATTTTGTTCGCTTATTAATTTGGTTTTTGTATTTTGTATTTTGTATCTCTTCTCTTTTCGCAACCGAGGAAAATCG
AAAAGAATGGAACAAGTCTGTCAAAGAAAAAATTCTCAAGATGAACGAAGCTCGAGAAGAAACCGAATCAATTCCTTATC
TAGAAAAGTTCGTGGAAAAAAATCCAGCGGATTTGACCGTTAAACTTTGGTATGCAAGAGCCTTATTCTATCGAAAAGAT
TTGGAAATTCCCGAACACTCGGAGGAAATTTTTTCTAGAACAGAAAAATTAAAGAAAATCAAAACAAATTATTTACTAGC
AGCAAAAACGTTTGAAGAAGTCTTAAAATATCTTTCTCAAGCAACTCCTAGAGATCCGGATCTAGGCAAATGGCATTTTC
TTTGGGCCATGTCAGAATGGTATGCTGGAAGAGAAGACCGAGCGATTCAGATCTTTAAGAAATCTTTTAAATACGATTTC
CGACTTAACGAAGCAAATTACAATATCGCATGTATCTATCAAACTCTAGGTCAATTAAAGGACGCAGAAATTTATTTTAG
AGCATATCTGAAAAACGATAAAGAAATGAGAGAAGAAAACTGA

Upstream 100 bases:

>100_bases
ATAGATCAAACTGGAAATCCCTACGATTTTGTAGAAGACATATATCCTGAAAACGGAAAAAACCTATTCATATATCTTTA
AGGTTCATTCCAATTTTATC

Downstream 100 bases:

>100_bases
TGGCGAAAGTAGATAAACGATTTCAACTTTTAATGACAGAAGAAGAATTAGAACTTCTTAAAAAAGAAGCAGAAAAAAGA
AATCTATCTGCGGGAGAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 200; Mature: 200

Protein sequence:

>200_residues
MYFVRLLIWFLYFVFCISSLFATEENRKEWNKSVKEKILKMNEAREETESIPYLEKFVEKNPADLTVKLWYARALFYRKD
LEIPEHSEEIFSRTEKLKKIKTNYLLAAKTFEEVLKYLSQATPRDPDLGKWHFLWAMSEWYAGREDRAIQIFKKSFKYDF
RLNEANYNIACIYQTLGQLKDAEIYFRAYLKNDKEMREEN

Sequences:

>Translated_200_residues
MYFVRLLIWFLYFVFCISSLFATEENRKEWNKSVKEKILKMNEAREETESIPYLEKFVEKNPADLTVKLWYARALFYRKD
LEIPEHSEEIFSRTEKLKKIKTNYLLAAKTFEEVLKYLSQATPRDPDLGKWHFLWAMSEWYAGREDRAIQIFKKSFKYDF
RLNEANYNIACIYQTLGQLKDAEIYFRAYLKNDKEMREEN
>Mature_200_residues
MYFVRLLIWFLYFVFCISSLFATEENRKEWNKSVKEKILKMNEAREETESIPYLEKFVEKNPADLTVKLWYARALFYRKD
LEIPEHSEEIFSRTEKLKKIKTNYLLAAKTFEEVLKYLSQATPRDPDLGKWHFLWAMSEWYAGREDRAIQIFKKSFKYDF
RLNEANYNIACIYQTLGQLKDAEIYFRAYLKNDKEMREEN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24334; Mature: 24334

Theoretical pI: Translated: 8.55; Mature: 8.55

Prosite motif: PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYFVRLLIWFLYFVFCISSLFATEENRKEWNKSVKEKILKMNEAREETESIPYLEKFVEK
CHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHC
NPADLTVKLWYARALFYRKDLEIPEHSEEIFSRTEKLKKIKTNYLLAAKTFEEVLKYLSQ
CCCCEEHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ATPRDPDLGKWHFLWAMSEWYAGREDRAIQIFKKSFKYDFRLNEANYNIACIYQTLGQLK
CCCCCCCCCCHHHHEEHHHHHCCCCCHHHHHHHHHHCCCEEECCCCCCHHHHHHHHCCCC
DAEIYFRAYLKNDKEMREEN
CHHHHHHHHHCCCHHHHCCC
>Mature Secondary Structure
MYFVRLLIWFLYFVFCISSLFATEENRKEWNKSVKEKILKMNEAREETESIPYLEKFVEK
CHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHC
NPADLTVKLWYARALFYRKDLEIPEHSEEIFSRTEKLKKIKTNYLLAAKTFEEVLKYLSQ
CCCCEEHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ATPRDPDLGKWHFLWAMSEWYAGREDRAIQIFKKSFKYDFRLNEANYNIACIYQTLGQLK
CCCCCCCCCCHHHHEEHHHHHCCCCCHHHHHHHHHHCCCEEECCCCCCHHHHHHHHCCCC
DAEIYFRAYLKNDKEMREEN
CHHHHHHHHHCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA