Click here to switch to the map view.

The map label for this gene is 45656184

Identifier: 45656184

GI number: 45656184

Start: 319105

End: 319524

Strand: Reverse

Name: 45656184

Synonym: LIC10280

Alternate gene names: NA

Gene position: 319524-319105 (Counterclockwise)

Preceding gene: 45656190

Following gene: 45656180

Centisome position: 7.47

GC content: 39.52

Gene sequence:

>420_bases
TTGACTTTTCCAAAAACAAATTCAAGATTTCTTTTACTCTTTAAGGAGAAGACATTCATGTTTCGAATCATTTCAAAATT
CTTCCTCGCCCTTCTAGTATTTGGTTTTATTTCAACCTCTTACGCACAGATCGGTCAAATCAATCCTTCCTCCATTAGCG
GTAAATACAAGGTTTCTGGAACCAACCCAAACGGTTCCTCTTACAACGGTAGCGTTACGATCTCTCAATCTAACGGAGAA
TACCTTTTTACCTGGACGGTTGCTGGTCAAACTTTCACAGGAACCGGAACCCTTGAAGGTACTACTTTGACAGTAGATTG
GGGAGAAACAGAACCAGTAATCTATGAAGTAAAAAACGGTGGTAAACTTTTAGAAGGAACTTGGGCCGGAGGAAACGCAA
CTGAAACCTTAAGAAAATAA

Upstream 100 bases:

>100_bases
TATCGAAAGTCCATTTCTTAAAACCCAACCGTCAAAGTAAATTTTTTATTTAAAACTTATAACGTGCTACGGATCTGAGT
TCTTACTCTTTGAATATGAA

Downstream 100 bases:

>100_bases
TAATATAAACTCGCCTTCGTTTTTATTTAGTAAAACAAAAATGTAAAACGTAGGCCGGGTTTGTTTTTCATAAAAATTTT
CTTGGTTTGCTTTATTTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 139; Mature: 138

Protein sequence:

>139_residues
MTFPKTNSRFLLLFKEKTFMFRIISKFFLALLVFGFISTSYAQIGQINPSSISGKYKVSGTNPNGSSYNGSVTISQSNGE
YLFTWTVAGQTFTGTGTLEGTTLTVDWGETEPVIYEVKNGGKLLEGTWAGGNATETLRK

Sequences:

>Translated_139_residues
MTFPKTNSRFLLLFKEKTFMFRIISKFFLALLVFGFISTSYAQIGQINPSSISGKYKVSGTNPNGSSYNGSVTISQSNGE
YLFTWTVAGQTFTGTGTLEGTTLTVDWGETEPVIYEVKNGGKLLEGTWAGGNATETLRK
>Mature_138_residues
TFPKTNSRFLLLFKEKTFMFRIISKFFLALLVFGFISTSYAQIGQINPSSISGKYKVSGTNPNGSSYNGSVTISQSNGEY
LFTWTVAGQTFTGTGTLEGTTLTVDWGETEPVIYEVKNGGKLLEGTWAGGNATETLRK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15193; Mature: 15062

Theoretical pI: Translated: 9.70; Mature: 9.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFPKTNSRFLLLFKEKTFMFRIISKFFLALLVFGFISTSYAQIGQINPSSISGKYKVSG
CCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCEEEEEC
TNPNGSSYNGSVTISQSNGEYLFTWTVAGQTFTGTGTLEGTTLTVDWGETEPVIYEVKNG
CCCCCCCCCCEEEEECCCCCEEEEEEECCCEEECCCCCCCCEEEEECCCCCCEEEEECCC
GKLLEGTWAGGNATETLRK
CEEEEEEECCCCHHHHHCC
>Mature Secondary Structure 
TFPKTNSRFLLLFKEKTFMFRIISKFFLALLVFGFISTSYAQIGQINPSSISGKYKVSG
CCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCEEEEEC
TNPNGSSYNGSVTISQSNGEYLFTWTVAGQTFTGTGTLEGTTLTVDWGETEPVIYEVKNG
CCCCCCCCCCEEEEECCCCCEEEEEEECCCEEECCCCCCCCEEEEECCCCCCEEEEECCC
GKLLEGTWAGGNATETLRK
CEEEEEEECCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA