Click here to switch to the map view.

The map label for this gene is 45656167

Identifier: 45656167

GI number: 45656167

Start: 299476

End: 300321

Strand: Direct

Name: 45656167

Synonym: LIC10262

Alternate gene names: NA

Gene position: 299476-300321 (Clockwise)

Preceding gene: 45656164

Following gene: 45656168

Centisome position: 7.0

GC content: 34.87

Gene sequence:

>846_bases
TTGAATTACTTATCTTCGTTTCCCGAAAATAAATATATGAAAGCGGTTTTTGGAATTACGATTTACGTCGTTTTATCGGG
TCCATTTTCCGTTTTTGCGGATTATGCGAGTAATGGAGCTACACATCTTGTTCGAGTGGAAAGAGGAATTAAAACAAATG
AGTTTTTGATCCAAGCTTTGAATAGTACTATTTCCAATTTAGGTTCGGAAGCGAACAAAGCTCTTTATAAAAGAATTATT
CAACATCACGTTGAAACCAATCAATTATACTTTCAATTCGATTTGGAAAAATCTTATTCTGAGTTAAAACGTACTCAAGA
TTTACTTGTAATTCTTTATTCCGATGTAATCGAATCGAGTAGAAAAACTATCCGAGGTGAATTAGATTCTCTCGGACAAA
AAGCGATCCGAGAGACCGAAACCAAACCAAAAAAACATCTCGAAATGGCGTATAGAGAATTGAGTGCAGCGGAACAAAAA
AAAATTATTTCGGATAATACGAGACCATATTTACAGCCAATCAAATTGGAACTACTTTACGAATCCTTAAAGTTACTTAA
ACAATCTCGAAAGTATGTAGTTCTTCTTTCCATGAAGTATCTTTCTGATTTCCCGCCTGATCCGGAAACCGAAGACTTTA
CTGGAATTCTAAACGAAATCAATCGAGCTATGTTTTCTCGTAAGGACGAATTCGCTAAAATCCATTTTGACAATCACTTT
CATACCTATTCTGGTGAAAATTTATACGATAGTTATTGGCAAGCCCCCGCTTTAGAAGAATTAGAAAAACCTTTAGGCGA
AATAGATTCTGCTTATTCTAGAGCTAGACGAAATGCAAAACGTTGA

Upstream 100 bases:

>100_bases
GGCTTAAATAACTATCGTCTCAAAGCCTTCTGTTCAATTTGTAAGATGACTTACAGACATAATTTTTCAAAAAGTTAATT
TCTTATTATTCCTGACTCGA

Downstream 100 bases:

>100_bases
TTGGATTTAGAGTTGGTTCCAATGATTTCTATAAAACTGAATATCCTTAATTTTTACCATACACTGCTTTACTCATCTTT
TTCAAATTGAGTATCTTAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 281; Mature: 281

Protein sequence:

>281_residues
MNYLSSFPENKYMKAVFGITIYVVLSGPFSVFADYASNGATHLVRVERGIKTNEFLIQALNSTISNLGSEANKALYKRII
QHHVETNQLYFQFDLEKSYSELKRTQDLLVILYSDVIESSRKTIRGELDSLGQKAIRETETKPKKHLEMAYRELSAAEQK
KIISDNTRPYLQPIKLELLYESLKLLKQSRKYVVLLSMKYLSDFPPDPETEDFTGILNEINRAMFSRKDEFAKIHFDNHF
HTYSGENLYDSYWQAPALEELEKPLGEIDSAYSRARRNAKR

Sequences:

>Translated_281_residues
MNYLSSFPENKYMKAVFGITIYVVLSGPFSVFADYASNGATHLVRVERGIKTNEFLIQALNSTISNLGSEANKALYKRII
QHHVETNQLYFQFDLEKSYSELKRTQDLLVILYSDVIESSRKTIRGELDSLGQKAIRETETKPKKHLEMAYRELSAAEQK
KIISDNTRPYLQPIKLELLYESLKLLKQSRKYVVLLSMKYLSDFPPDPETEDFTGILNEINRAMFSRKDEFAKIHFDNHF
HTYSGENLYDSYWQAPALEELEKPLGEIDSAYSRARRNAKR
>Mature_281_residues
MNYLSSFPENKYMKAVFGITIYVVLSGPFSVFADYASNGATHLVRVERGIKTNEFLIQALNSTISNLGSEANKALYKRII
QHHVETNQLYFQFDLEKSYSELKRTQDLLVILYSDVIESSRKTIRGELDSLGQKAIRETETKPKKHLEMAYRELSAAEQK
KIISDNTRPYLQPIKLELLYESLKLLKQSRKYVVLLSMKYLSDFPPDPETEDFTGILNEINRAMFSRKDEFAKIHFDNHF
HTYSGENLYDSYWQAPALEELEKPLGEIDSAYSRARRNAKR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32618; Mature: 32618

Theoretical pI: Translated: 8.55; Mature: 8.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNYLSSFPENKYMKAVFGITIYVVLSGPFSVFADYASNGATHLVRVERGIKTNEFLIQAL
CCCHHCCCCCHHHHHHHHHHHEEEECCHHHHHHHHHCCCCCEEEEHHCCCCHHHHHHHHH
NSTISNLGSEANKALYKRIIQHHVETNQLYFQFDLEKSYSELKRTQDLLVILYSDVIESS
HHHHHHHCCHHHHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH
RKTIRGELDSLGQKAIRETETKPKKHLEMAYRELSAAEQKKIISDNTRPYLQPIKLELLY
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
ESLKLLKQSRKYVVLLSMKYLSDFPPDPETEDFTGILNEINRAMFSRKDEFAKIHFDNHF
HHHHHHHHCCCEEEEEEEHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCHHEEEEECCCE
HTYSGENLYDSYWQAPALEELEKPLGEIDSAYSRARRNAKR
ECCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNYLSSFPENKYMKAVFGITIYVVLSGPFSVFADYASNGATHLVRVERGIKTNEFLIQAL
CCCHHCCCCCHHHHHHHHHHHEEEECCHHHHHHHHHCCCCCEEEEHHCCCCHHHHHHHHH
NSTISNLGSEANKALYKRIIQHHVETNQLYFQFDLEKSYSELKRTQDLLVILYSDVIESS
HHHHHHHCCHHHHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH
RKTIRGELDSLGQKAIRETETKPKKHLEMAYRELSAAEQKKIISDNTRPYLQPIKLELLY
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
ESLKLLKQSRKYVVLLSMKYLSDFPPDPETEDFTGILNEINRAMFSRKDEFAKIHFDNHF
HHHHHHHHCCCEEEEEEEHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCHHEEEEECCCE
HTYSGENLYDSYWQAPALEELEKPLGEIDSAYSRARRNAKR
ECCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA