Click here to switch to the map view.

The map label for this gene is ctaA

Identifier: 45656110

GI number: 45656110

Start: 234829

End: 235776

Strand: Reverse

Name: ctaA

Synonym: LIC10205

Alternate gene names: 45656110

Gene position: 235776-234829 (Counterclockwise)

Preceding gene: 45656117

Following gene: 45656109

Centisome position: 5.51

GC content: 34.07

Gene sequence:

>948_bases
ATGAACTCTAACTCAGATATTTCTTCAAAATTTAGTTTGTTTTATAAAGTCTCTCTATTCTTGAGTGTACTCATCTTTTT
GAATTTACTCTATGGGCCTTTGGTCAGAGCGACTGGTTCAGGTCTTGCTTGTCCTGATTGGCCGTTTTGTTTTGGAAAGA
TTTTTCCGACTTTTGATTTCCAGATTTTTATGGAAGTCTCTCATCGTTATTATTCTGCTTTTTTAGGACTGATTCTTCTA
TGTCTTACGATTTGGACATTTGCAGATAAAATTCTTAGAAAAGAATTTGGTATCTATTTAGGAATCGCAATCCTTTTACT
AATCTCCCAAATCAATTTAGGAAGACTTACCGTCACTTTAAAACTCGATCCTACTTCCGTTAATCTTCACTTATTGAATG
CAATCGCTTTCTTTTTAGTTATACTTACCGTTTCTATCAACTCGAGAGAAAAAGTTTTACATCAAAGTGAACATTTTATC
GAAACCACTCATTTATTCAGAAAAGATAATATCCTTTATTTCATTCTTTTGATCGGAATTGTGATTCAGATTATTTTAGG
TGGTCGTGTTAGTTCCCACTACGCAGGACTTGCTTGCCCAGACTTTCCAACTTGTTGGGGACAATGGATCCCAGATAATC
CATTAGAAATTGTTAAAATTCAAGTATTCCATAGATTTGGTGCTTATGCAGTTGTTTTGTTACTTGTAGCAGCTCTTAGT
TTTGCAATTTGGAAAAATTTTCCAACTACCTCAAGAAGATTCCTTCAAATTTCTATGTATCTTGTAGTAGCTCAAGTTAT
TTTAGGAATTTTGAATATATTTTTTGGCCTACCAAAACTTATAACCGCACTTCATACCGGCTTTGCTGTACTTTTACTTA
CCTCTACTTATTTGTCCCTAATTTCCAGAGTTGTCGTATTAACTAACGAACGGAGGGCCGAAAAATAA

Upstream 100 bases:

>100_bases
TAGAAATTTCGCGCTTACATTTGTCTACACTTTCATTGCTCTTAAAAATCGATTTTCGAGTATGGTATTTCAGAACCTCT
TTTGAGGATTTCAAAAAAGA

Downstream 100 bases:

>100_bases
TTTCGGCAAGCTATAATAATGGCTAGTTCCACTTTCTTTTCAGACTGGAATCAAATGCTGAAACCCAGAGTAACCTCTCT
GGTTTTAGCGACAATCATTC

Product: cytochrome oxidase assembly protein

Products: NA

Alternate protein names: HAS; Cytochrome aa3-controlling protein [H]

Number of amino acids: Translated: 315; Mature: 315

Protein sequence:

>315_residues
MNSNSDISSKFSLFYKVSLFLSVLIFLNLLYGPLVRATGSGLACPDWPFCFGKIFPTFDFQIFMEVSHRYYSAFLGLILL
CLTIWTFADKILRKEFGIYLGIAILLLISQINLGRLTVTLKLDPTSVNLHLLNAIAFFLVILTVSINSREKVLHQSEHFI
ETTHLFRKDNILYFILLIGIVIQIILGGRVSSHYAGLACPDFPTCWGQWIPDNPLEIVKIQVFHRFGAYAVVLLLVAALS
FAIWKNFPTTSRRFLQISMYLVVAQVILGILNIFFGLPKLITALHTGFAVLLLTSTYLSLISRVVVLTNERRAEK

Sequences:

>Translated_315_residues
MNSNSDISSKFSLFYKVSLFLSVLIFLNLLYGPLVRATGSGLACPDWPFCFGKIFPTFDFQIFMEVSHRYYSAFLGLILL
CLTIWTFADKILRKEFGIYLGIAILLLISQINLGRLTVTLKLDPTSVNLHLLNAIAFFLVILTVSINSREKVLHQSEHFI
ETTHLFRKDNILYFILLIGIVIQIILGGRVSSHYAGLACPDFPTCWGQWIPDNPLEIVKIQVFHRFGAYAVVLLLVAALS
FAIWKNFPTTSRRFLQISMYLVVAQVILGILNIFFGLPKLITALHTGFAVLLLTSTYLSLISRVVVLTNERRAEK
>Mature_315_residues
MNSNSDISSKFSLFYKVSLFLSVLIFLNLLYGPLVRATGSGLACPDWPFCFGKIFPTFDFQIFMEVSHRYYSAFLGLILL
CLTIWTFADKILRKEFGIYLGIAILLLISQINLGRLTVTLKLDPTSVNLHLLNAIAFFLVILTVSINSREKVLHQSEHFI
ETTHLFRKDNILYFILLIGIVIQIILGGRVSSHYAGLACPDFPTCWGQWIPDNPLEIVKIQVFHRFGAYAVVLLLVAALS
FAIWKNFPTTSRRFLQISMYLVVAQVILGILNIFFGLPKLITALHTGFAVLLLTSTYLSLISRVVVLTNERRAEK

Specific function: Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group [H]

COG id: COG1612

COG function: function code O; Uncharacterized protein required for cytochrome oxidase assembly

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the COX15/CtaA family. Type 1 subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003780 [H]

Pfam domain/function: PF02628 COX15-CtaA [H]

EC number: NA

Molecular weight: Translated: 35630; Mature: 35630

Theoretical pI: Translated: 9.65; Mature: 9.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSNSDISSKFSLFYKVSLFLSVLIFLNLLYGPLVRATGSGLACPDWPFCFGKIFPTFDF
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCHHH
QIFMEVSHRYYSAFLGLILLCLTIWTFADKILRKEFGIYLGIAILLLISQINLGRLTVTL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEE
KLDPTSVNLHLLNAIAFFLVILTVSINSREKVLHQSEHFIETTHLFRKDNILYFILLIGI
EECCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
VIQIILGGRVSSHYAGLACPDFPTCWGQWIPDNPLEIVKIQVFHRFGAYAVVLLLVAALS
HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
FAIWKNFPTTSRRFLQISMYLVVAQVILGILNIFFGLPKLITALHTGFAVLLLTSTYLSL
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ISRVVVLTNERRAEK
HHHHHHHCCHHCCCC
>Mature Secondary Structure
MNSNSDISSKFSLFYKVSLFLSVLIFLNLLYGPLVRATGSGLACPDWPFCFGKIFPTFDF
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCHHH
QIFMEVSHRYYSAFLGLILLCLTIWTFADKILRKEFGIYLGIAILLLISQINLGRLTVTL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEE
KLDPTSVNLHLLNAIAFFLVILTVSINSREKVLHQSEHFIETTHLFRKDNILYFILLIGI
EECCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
VIQIILGGRVSSHYAGLACPDFPTCWGQWIPDNPLEIVKIQVFHRFGAYAVVLLLVAALS
HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
FAIWKNFPTTSRRFLQISMYLVVAQVILGILNIFFGLPKLITALHTGFAVLLLTSTYLSL
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ISRVVVLTNERRAEK
HHHHHHHCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA