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The map label for this gene is 45656084

Identifier: 45656084

GI number: 45656084

Start: 208015

End: 208560

Strand: Direct

Name: 45656084

Synonym: LIC10179

Alternate gene names: NA

Gene position: 208015-208560 (Clockwise)

Preceding gene: 45656083

Following gene: 45656085

Centisome position: 4.86

GC content: 39.93

Gene sequence:

>546_bases
ATGATCGGAGGAATTACACCACCTGCGCTTCCCGCAGGGTATCTTCCTTTGGAGGCAATAACGGGGGATATAGATCGTTT
GAAAGTGAGTTGGTCCGGTAATAGATATGAGTTTCCTTCCGGCACTAAAATCAAAGCGCATCGAGAAAAAGAAATCGTAA
TGACTCCTATTCCAGGAGGAAAGAACGGAACTGTTAAAGAACTTACCGGATACAAAGATTGGACGATTACGGTAGAATTC
ACTCTTCTTGCTTCGATTTATGGAGCTGGGAGTTTTTCGGCTCCTTCAAATCCTTTGATTAAAACTATGAGGCAAAAAAT
GAGAGAATTGAGGGATCTTTGGGAACAAGAAGAAACTCTTTGGTTATCCCATGCAATGTTAAGAGTATTAGGAATTACGA
ATGTAGTTTGTCAAAAGTTCGAACTTTTGAATGCTCCGATTCAATATGAACAAGGCATTATCATCACTTTTTTGTCCGAC
GACGAATACGATTTGGATCTTGCTTCTATAGAAGCTAAAAACGGTGTAGTGGAGTCTTCTTTATGA

Upstream 100 bases:

>100_bases
TGGTGATCGGAAATAAAATTACGGATAAGAAAAAAATCAGCGAGATGATTACGGATGCAATTTTTCAAGAATTGGACCGT
TTTGAGGAGATGGAACTAAT

Downstream 100 bases:

>100_bases
GTCAGTTTTACGTTCTTAAAAACAACGATACTCTACAAAGGCTTTCTGCTCGTTATTACGGAAAATGGGAAATTTGGAGA
TTGATCCTGGATAACAACCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 181; Mature: 181

Protein sequence:

>181_residues
MIGGITPPALPAGYLPLEAITGDIDRLKVSWSGNRYEFPSGTKIKAHREKEIVMTPIPGGKNGTVKELTGYKDWTITVEF
TLLASIYGAGSFSAPSNPLIKTMRQKMRELRDLWEQEETLWLSHAMLRVLGITNVVCQKFELLNAPIQYEQGIIITFLSD
DEYDLDLASIEAKNGVVESSL

Sequences:

>Translated_181_residues
MIGGITPPALPAGYLPLEAITGDIDRLKVSWSGNRYEFPSGTKIKAHREKEIVMTPIPGGKNGTVKELTGYKDWTITVEF
TLLASIYGAGSFSAPSNPLIKTMRQKMRELRDLWEQEETLWLSHAMLRVLGITNVVCQKFELLNAPIQYEQGIIITFLSD
DEYDLDLASIEAKNGVVESSL
>Mature_181_residues
MIGGITPPALPAGYLPLEAITGDIDRLKVSWSGNRYEFPSGTKIKAHREKEIVMTPIPGGKNGTVKELTGYKDWTITVEF
TLLASIYGAGSFSAPSNPLIKTMRQKMRELRDLWEQEETLWLSHAMLRVLGITNVVCQKFELLNAPIQYEQGIIITFLSD
DEYDLDLASIEAKNGVVESSL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20131; Mature: 20131

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGGITPPALPAGYLPLEAITGDIDRLKVSWSGNRYEFPSGTKIKAHREKEIVMTPIPGG
CCCCCCCCCCCCCCCCHHHHCCCCCEEEEEECCCEEECCCCCEEEECCCCEEEEECCCCC
KNGTVKELTGYKDWTITVEFTLLASIYGAGSFSAPSNPLIKTMRQKMRELRDLWEQEETL
CCCCHHHCCCCCCEEEEEEHEEEHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
WLSHAMLRVLGITNVVCQKFELLNAPIQYEQGIIITFLSDDEYDLDLASIEAKNGVVESS
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCEEEECCCCEECCC
L
C
>Mature Secondary Structure
MIGGITPPALPAGYLPLEAITGDIDRLKVSWSGNRYEFPSGTKIKAHREKEIVMTPIPGG
CCCCCCCCCCCCCCCCHHHHCCCCCEEEEEECCCEEECCCCCEEEECCCCEEEEECCCCC
KNGTVKELTGYKDWTITVEFTLLASIYGAGSFSAPSNPLIKTMRQKMRELRDLWEQEETL
CCCCHHHCCCCCCEEEEEEHEEEHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
WLSHAMLRVLGITNVVCQKFELLNAPIQYEQGIIITFLSDDEYDLDLASIEAKNGVVESS
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCEEEECCCCEECCC
L
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA