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The map label for this gene is 45656083

Identifier: 45656083

GI number: 45656083

Start: 205214

End: 205633

Strand: Direct

Name: 45656083

Synonym: LIC10177

Alternate gene names: NA

Gene position: 205214-205633 (Clockwise)

Preceding gene: 45656082

Following gene: 45656084

Centisome position: 4.8

GC content: 39.52

Gene sequence:

>420_bases
GTGTATATAATGAATCCATTAATTAGTTCAATTCCTGCTCTTAAGGAAGCTTTTGAAAAACTTCCTCAACCGTATCAGAA
CATAGACGACGATTTTATTGCACGCAACAAGGACGTGATCGATATGATCAAATCCCATTTTGCGGATAAAGGAGGTCTTC
ATGTTCTAGATGCGGGCGAAGGTAGAAAGATAATCTGTAGAGTGCCAAATAAAACTCAAGTAGATGAAACTTTAGAAAAA
GCTAGGAAAGAAAAGCAAACCGATGTCGCACAACGTCTTACAGGTCAGTGTTGTTTATATCCTAGTTTCGAAGTCGTAAA
CGGATGGGCCCAGGATTCTCCGGGTATCTTTATCCCGATTAGTAATAAACTGATTGAGTTGACTGCCACAACCCAAGAGG
TAACGGCAAAAAAGTTATAG

Upstream 100 bases:

>100_bases
GGGAGCGGTAGCTGTTCCTTTGGAAATCGCTTTGCTTTCGATTCCTATCATTTCGTTTGCGTAATGGCGTTGAATAGTCA
TTTAAAAATCAAGGAAATAA

Downstream 100 bases:

>100_bases
GAGAGAAGCTTAGGCTTCTGAAGGTCGGGAATGGTGCGTTAGACGTTCTTCTGATGTACTATTTCCCTGGAAGAAAAATA
GAATACCCAAAAGACGGAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 139; Mature: 139

Protein sequence:

>139_residues
MYIMNPLISSIPALKEAFEKLPQPYQNIDDDFIARNKDVIDMIKSHFADKGGLHVLDAGEGRKIICRVPNKTQVDETLEK
ARKEKQTDVAQRLTGQCCLYPSFEVVNGWAQDSPGIFIPISNKLIELTATTQEVTAKKL

Sequences:

>Translated_139_residues
MYIMNPLISSIPALKEAFEKLPQPYQNIDDDFIARNKDVIDMIKSHFADKGGLHVLDAGEGRKIICRVPNKTQVDETLEK
ARKEKQTDVAQRLTGQCCLYPSFEVVNGWAQDSPGIFIPISNKLIELTATTQEVTAKKL
>Mature_139_residues
MYIMNPLISSIPALKEAFEKLPQPYQNIDDDFIARNKDVIDMIKSHFADKGGLHVLDAGEGRKIICRVPNKTQVDETLEK
ARKEKQTDVAQRLTGQCCLYPSFEVVNGWAQDSPGIFIPISNKLIELTATTQEVTAKKL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15604; Mature: 15604

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYIMNPLISSIPALKEAFEKLPQPYQNIDDDFIARNKDVIDMIKSHFADKGGLHVLDAGE
CCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCHHHHHHHHHCCCCCCEEEEECCC
GRKIICRVPNKTQVDETLEKARKEKQTDVAQRLTGQCCLYPSFEVVNGWAQDSPGIFIPI
CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCHHHHCCCCCCCCCEEEEE
SNKLIELTATTQEVTAKKL
CCCEEEEECCHHHHHHHCC
>Mature Secondary Structure
MYIMNPLISSIPALKEAFEKLPQPYQNIDDDFIARNKDVIDMIKSHFADKGGLHVLDAGE
CCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCHHHHHHHHHCCCCCCEEEEECCC
GRKIICRVPNKTQVDETLEKARKEKQTDVAQRLTGQCCLYPSFEVVNGWAQDSPGIFIPI
CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCHHHHCCCCCCCCCEEEEE
SNKLIELTATTQEVTAKKL
CCCEEEEECCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA