Click here to switch to the map view.

The map label for this gene is 45656078

Identifier: 45656078

GI number: 45656078

Start: 200616

End: 201197

Strand: Direct

Name: 45656078

Synonym: LIC10172

Alternate gene names: NA

Gene position: 200616-201197 (Clockwise)

Preceding gene: 45656077

Following gene: 45656079

Centisome position: 4.69

GC content: 30.58

Gene sequence:

>582_bases
TTGTTGATTGAAATGATTTCTTACATATCTCATCCAATTGCTCCTTGGAATCCTCAGAGAAAGGACCCAATTACTCCTCG
TCTTTTTTTAAAAGATTACCAGCAGTGTATGGGAAATATATTTCAAGATTTTATAATTTACATAGGTCTAATTTATAGAA
TACCAGACTTTATTCATCTTACTACCTATAATTATTATGCTCTTTTTGAAGATTGGGCGATTAAAAATAAAAAAAATGTA
TATGATTCTGGAGACCATTCTGAATATTTTAATATTCTAATGAATTCAAATAACATTCCTTTTAAGATTGTTAAGAAAAA
GGGAGACAAGGAAGAGCTTTGTAGTTATTTTGAAAATGGAAATTTTCCTTGCGGCTTAGGAACGTATCTTACTAAAAAAG
GACATATCATTCGGGGTATTGGTATTGTGATCAATGACGAAGGTAAAAAATTTTTAAAGGTTTCGGACCCTTATGGAGTT
GGGCCTTCTTATTTAGATCCTTATGGCTATATGATTCAATATGAATTAGACGTCTTGTTTGATTTAGGTGTTCCTACTGC
TCTCTATTTGGAAAATTTTTAA

Upstream 100 bases:

>100_bases
TTCAAGATCCAAAAAGATCGGATGCAACTGTTCAAGATGTAGAAAGTAGGCAGCTGTAAATGTTTTCGATCTAAAAAGAT
TATGATCTTAAATAATTAGT

Downstream 100 bases:

>100_bases
TTCCATTGATTTTTTCGGTTTAGGATAAAGTATTCTACCCATCAATTTAGAATATTTATTTTTGTAAATTTTTTGCGAAG
GAGCCTAAGATGTAGGAATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 193; Mature: 193

Protein sequence:

>193_residues
MLIEMISYISHPIAPWNPQRKDPITPRLFLKDYQQCMGNIFQDFIIYIGLIYRIPDFIHLTTYNYYALFEDWAIKNKKNV
YDSGDHSEYFNILMNSNNIPFKIVKKKGDKEELCSYFENGNFPCGLGTYLTKKGHIIRGIGIVINDEGKKFLKVSDPYGV
GPSYLDPYGYMIQYELDVLFDLGVPTALYLENF

Sequences:

>Translated_193_residues
MLIEMISYISHPIAPWNPQRKDPITPRLFLKDYQQCMGNIFQDFIIYIGLIYRIPDFIHLTTYNYYALFEDWAIKNKKNV
YDSGDHSEYFNILMNSNNIPFKIVKKKGDKEELCSYFENGNFPCGLGTYLTKKGHIIRGIGIVINDEGKKFLKVSDPYGV
GPSYLDPYGYMIQYELDVLFDLGVPTALYLENF
>Mature_193_residues
MLIEMISYISHPIAPWNPQRKDPITPRLFLKDYQQCMGNIFQDFIIYIGLIYRIPDFIHLTTYNYYALFEDWAIKNKKNV
YDSGDHSEYFNILMNSNNIPFKIVKKKGDKEELCSYFENGNFPCGLGTYLTKKGHIIRGIGIVINDEGKKFLKVSDPYGV
GPSYLDPYGYMIQYELDVLFDLGVPTALYLENF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22490; Mature: 22490

Theoretical pI: Translated: 6.11; Mature: 6.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIEMISYISHPIAPWNPQRKDPITPRLFLKDYQQCMGNIFQDFIIYIGLIYRIPDFIHL
CHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE
TTYNYYALFEDWAIKNKKNVYDSGDHSEYFNILMNSNNIPFKIVKKKGDKEELCSYFENG
ECCCEEEEEECHHCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEECCCCHHHHHHHHHCC
NFPCGLGTYLTKKGHIIRGIGIVINDEGKKFLKVSDPYGVGPSYLDPYGYMIQYELDVLF
CCCCCCCHHHCCCCCEEEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCEEEEEEEEEEE
DLGVPTALYLENF
ECCCCEEEEEECC
>Mature Secondary Structure
MLIEMISYISHPIAPWNPQRKDPITPRLFLKDYQQCMGNIFQDFIIYIGLIYRIPDFIHL
CHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE
TTYNYYALFEDWAIKNKKNVYDSGDHSEYFNILMNSNNIPFKIVKKKGDKEELCSYFENG
ECCCEEEEEECHHCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEECCCCHHHHHHHHHCC
NFPCGLGTYLTKKGHIIRGIGIVINDEGKKFLKVSDPYGVGPSYLDPYGYMIQYELDVLF
CCCCCCCHHHCCCCCEEEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCEEEEEEEEEEE
DLGVPTALYLENF
ECCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA