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The map label for this gene is 45656045

Identifier: 45656045

GI number: 45656045

Start: 161123

End: 161521

Strand: Reverse

Name: 45656045

Synonym: LIC10135

Alternate gene names: NA

Gene position: 161521-161123 (Counterclockwise)

Preceding gene: 45656046

Following gene: 45656043

Centisome position: 3.78

GC content: 37.34

Gene sequence:

>399_bases
ATGCTTTTAGTTCCCACTTACATCGCAGATTCTCCGATCGGCGGCTTTGGCCTCTTTGCAGGTCGAGATATTCAAAAAGG
AGAACTGATTTGGAAATATCATCCTAAAACGGTTTGGGTTTTAACCGATTCCGAATTAAATTTACTTCCACATTCCGTTC
AAGAAATGTTTCGCACATACTCTTATCAAACAGAAGGGAAATGGTTTTATTGTTCGGACAATTCCAAATTTATGAACCAC
AGTGATGATCCAAATACAAAAGAAGATTTTACGAGTGATCAAACCAATCCTATAGGACAGGATAGCGCGACTAGACTAAT
TCTAAAAGGAGAAGAGCTTACTTGTAACTATAAGCTCTTTGACGATAATTGGAAAATGAAACTTGGTTTAACCTCTTGA

Upstream 100 bases:

>100_bases
AAAGATTTTCGGTTCCTGAACCGGAACAACAAGCAATGGTCCTATAAAGAACTGTTTTCTTACTTGCAATTTTTTTCCGG
GCTAATTTACATTCTTTCCA

Downstream 100 bases:

>100_bases
AGCTTTAATCTGTTCCTTAAGTTGAGCCGCTGCGAGAGCATAACCTCCATCTGCGGAGTCCACAAAATGAACTTCCCTTA
TAGAACCCTCATGCAAAGCA

Product: SET domain-containing protein

Products: NA

Alternate protein names: SET Domain-Containing Protein

Number of amino acids: Translated: 132; Mature: 132

Protein sequence:

>132_residues
MLLVPTYIADSPIGGFGLFAGRDIQKGELIWKYHPKTVWVLTDSELNLLPHSVQEMFRTYSYQTEGKWFYCSDNSKFMNH
SDDPNTKEDFTSDQTNPIGQDSATRLILKGEELTCNYKLFDDNWKMKLGLTS

Sequences:

>Translated_132_residues
MLLVPTYIADSPIGGFGLFAGRDIQKGELIWKYHPKTVWVLTDSELNLLPHSVQEMFRTYSYQTEGKWFYCSDNSKFMNH
SDDPNTKEDFTSDQTNPIGQDSATRLILKGEELTCNYKLFDDNWKMKLGLTS
>Mature_132_residues
MLLVPTYIADSPIGGFGLFAGRDIQKGELIWKYHPKTVWVLTDSELNLLPHSVQEMFRTYSYQTEGKWFYCSDNSKFMNH
SDDPNTKEDFTSDQTNPIGQDSATRLILKGEELTCNYKLFDDNWKMKLGLTS

Specific function: Unknown

COG id: COG2940

COG function: function code R; Proteins containing SET domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15226; Mature: 15226

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: PS50280 SET

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLVPTYIADSPIGGFGLFAGRDIQKGELIWKYHPKTVWVLTDSELNLLPHSVQEMFRTY
CEEECCCCCCCCCCCEEEECCCCCCCCCEEEEECCCEEEEEECCCCCCCCHHHHHHHHHC
SYQTEGKWFYCSDNSKFMNHSDDPNTKEDFTSDQTNPIGQDSATRLILKGEELTCNYKLF
CCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEEEEEEE
DDNWKMKLGLTS
CCCEEEEEEECC
>Mature Secondary Structure
MLLVPTYIADSPIGGFGLFAGRDIQKGELIWKYHPKTVWVLTDSELNLLPHSVQEMFRTY
CEEECCCCCCCCCCCEEEECCCCCCCCCEEEEECCCEEEEEECCCCCCCCHHHHHHHHHC
SYQTEGKWFYCSDNSKFMNHSDDPNTKEDFTSDQTNPIGQDSATRLILKGEELTCNYKLF
CCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEEEEEEE
DDNWKMKLGLTS
CCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA