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The map label for this gene is 45655970

Identifier: 45655970

GI number: 45655970

Start: 69026

End: 69952

Strand: Direct

Name: 45655970

Synonym: LIC10056

Alternate gene names: NA

Gene position: 69026-69952 (Clockwise)

Preceding gene: 45655968

Following gene: 45655971

Centisome position: 1.61

GC content: 36.35

Gene sequence:

>927_bases
TTGAAACAATATAAATTTTCAACACACATAATTTTGTTTGTATTAACCTTTTTGACTCTCACATTTCAGAGTGAATTTTT
CAAGATCCCTTTCTTATCGGCTGAATCTTTAAAGGAATTATTTTTTCTTAGACTTCCTTATTCTCTTTCTTTGATTATAA
TTCTTTTCGCTCACGAGATGGGGCATTTTTTAGCAGCCCGTTATTACGGTATTCAAGTAACCTGGCCGTATTTTATACCA
ATTCCATTAGCCCCTATTGGAACTATGGGTGCGGTCATTCGAATTCTGGAACCAATCCGGAATAAAAAGCAACTCTTTGA
CATAGGGATCTGGGGTCCTCTTATGAGTTTGATTCTTTCCGTACCTTGTTATGTGGTAGGAATTTATATGTCTTCTTTGG
TTCCTATGGAAAGTGTAAAAGGAAATCCAGGAATCATTTCTTTTGGGGAATCTATTTTTACGATTTTCGTAAATCAATGG
ATTTTAGGACCTTTTAATCCTGCCATTCAAGACGTCTGGATTCATCCTTTGGCTCAGGCGGGTTGGGTTGGACTTCTTGT
AACGGCGATCAATTTACTTCCGTTTGGTCAATTAGATGGTGGTCACGTGATTTATTCCGTTTTTGGTGAAAAATATAGAA
ATTGGATTTATTATCTTTTTATTTGTTTTTTGTTTCTATGTCTGTGGAATTTTTCCTGGTTACTGTGGGGTTTCCTGATT
TATTTCATCATAAAAATAGAACATCCTTTTGTTCCTGACTCGGCGGTTCCATTGGATCGAGTTCGAAAGATTGGTGGTCT
GTTGATTTTATTTACGTTGATCTTCATCTTTGTACCTTCTCCCATCCAATTTGGAACGGATATAAATCGGCCTGGTCTTG
CTGAGGAAATATGGACTTCTCTCAAATCGGTTTATTCAGATCTTTAA

Upstream 100 bases:

>100_bases
CTGTAAAGTATTTGGTTTGAACAAGAACTGTTAAGGAAAAGGTTCAAAATTCGTGATATGATGTAAAGAGGATTCTTTCT
AAGAAGAATAGAATATAAAT

Downstream 100 bases:

>100_bases
TCCTTGTTCTGGTCGTAATTTCGACTCCGGTTTTTGACCAAGATCAAGAAATCAAACTTACGGAAAACGCATACGGTTTC
ACATACGACGGTACAAATTT

Product: hypothetical protein

Products: NA

Alternate protein names: Peptidase; Membrane-Associated Zn-Dependent Protease; M50 Family Peptidase; Metalloprotease; Membrane-Associated Metallopeptidase; Zinc Metalloprotease; M50B Family Peptidase; Zinc Protease; M50 Family Metallopeptidase; Membrane Associated Metalloprotease; Integral Membrane Protease; Peptidase Family; S2P Family Metalloprotease

Number of amino acids: Translated: 308; Mature: 308

Protein sequence:

>308_residues
MKQYKFSTHIILFVLTFLTLTFQSEFFKIPFLSAESLKELFFLRLPYSLSLIIILFAHEMGHFLAARYYGIQVTWPYFIP
IPLAPIGTMGAVIRILEPIRNKKQLFDIGIWGPLMSLILSVPCYVVGIYMSSLVPMESVKGNPGIISFGESIFTIFVNQW
ILGPFNPAIQDVWIHPLAQAGWVGLLVTAINLLPFGQLDGGHVIYSVFGEKYRNWIYYLFICFLFLCLWNFSWLLWGFLI
YFIIKIEHPFVPDSAVPLDRVRKIGGLLILFTLIFIFVPSPIQFGTDINRPGLAEEIWTSLKSVYSDL

Sequences:

>Translated_308_residues
MKQYKFSTHIILFVLTFLTLTFQSEFFKIPFLSAESLKELFFLRLPYSLSLIIILFAHEMGHFLAARYYGIQVTWPYFIP
IPLAPIGTMGAVIRILEPIRNKKQLFDIGIWGPLMSLILSVPCYVVGIYMSSLVPMESVKGNPGIISFGESIFTIFVNQW
ILGPFNPAIQDVWIHPLAQAGWVGLLVTAINLLPFGQLDGGHVIYSVFGEKYRNWIYYLFICFLFLCLWNFSWLLWGFLI
YFIIKIEHPFVPDSAVPLDRVRKIGGLLILFTLIFIFVPSPIQFGTDINRPGLAEEIWTSLKSVYSDL
>Mature_308_residues
MKQYKFSTHIILFVLTFLTLTFQSEFFKIPFLSAESLKELFFLRLPYSLSLIIILFAHEMGHFLAARYYGIQVTWPYFIP
IPLAPIGTMGAVIRILEPIRNKKQLFDIGIWGPLMSLILSVPCYVVGIYMSSLVPMESVKGNPGIISFGESIFTIFVNQW
ILGPFNPAIQDVWIHPLAQAGWVGLLVTAINLLPFGQLDGGHVIYSVFGEKYRNWIYYLFICFLFLCLWNFSWLLWGFLI
YFIIKIEHPFVPDSAVPLDRVRKIGGLLILFTLIFIFVPSPIQFGTDINRPGLAEEIWTSLKSVYSDL

Specific function: Unknown

COG id: COG0750

COG function: function code M; Predicted membrane-associated Zn-dependent proteases 1

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35339; Mature: 35339

Theoretical pI: Translated: 8.06; Mature: 8.06

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQYKFSTHIILFVLTFLTLTFQSEFFKIPFLSAESLKELFFLRLPYSLSLIIILFAHEM
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHH
GHFLAARYYGIQVTWPYFIPIPLAPIGTMGAVIRILEPIRNKKQLFDIGIWGPLMSLILS
HHHHHHHHEEEEEEECEEEECCCCCCHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHH
VPCYVVGIYMSSLVPMESVKGNPGIISFGESIFTIFVNQWILGPFNPAIQDVWIHPLAQA
HHHHHHHHHHHHCCCHHHCCCCCCEEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
GWVGLLVTAINLLPFGQLDGGHVIYSVFGEKYRNWIYYLFICFLFLCLWNFSWLLWGFLI
HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YFIIKIEHPFVPDSAVPLDRVRKIGGLLILFTLIFIFVPSPIQFGTDINRPGLAEEIWTS
HHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHH
LKSVYSDL
HHHHHHCC
>Mature Secondary Structure
MKQYKFSTHIILFVLTFLTLTFQSEFFKIPFLSAESLKELFFLRLPYSLSLIIILFAHEM
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHH
GHFLAARYYGIQVTWPYFIPIPLAPIGTMGAVIRILEPIRNKKQLFDIGIWGPLMSLILS
HHHHHHHHEEEEEEECEEEECCCCCCHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHH
VPCYVVGIYMSSLVPMESVKGNPGIISFGESIFTIFVNQWILGPFNPAIQDVWIHPLAQA
HHHHHHHHHHHHCCCHHHCCCCCCEEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
GWVGLLVTAINLLPFGQLDGGHVIYSVFGEKYRNWIYYLFICFLFLCLWNFSWLLWGFLI
HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YFIIKIEHPFVPDSAVPLDRVRKIGGLLILFTLIFIFVPSPIQFGTDINRPGLAEEIWTS
HHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHH
LKSVYSDL
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA