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The map label for this gene is rlpA

Identifier: 45655968

GI number: 45655968

Start: 66432

End: 67397

Strand: Direct

Name: rlpA

Synonym: LIC10054

Alternate gene names: 45655968

Gene position: 66432-67397 (Clockwise)

Preceding gene: 45655965

Following gene: 45655970

Centisome position: 1.55

GC content: 36.54

Gene sequence:

>966_bases
ATGGTTTTTTCCAGATCAACCGATTTGTTTAAAGGAATCAATAGGACCGAGGAAACTATGAAACAAATAGCAATCTTAAC
CGCCCTGATCATTTTTACGTCTTGTGCGTCGGTAGAGTCTAAACGAAGCGTCAGCGCTTCTGGAGATCCGTCGGAGATTT
TTTTTGAAAAAGAAATTATTCCGATGGATTCTAATTCAAATTTCGTTTCTCAAAAACCTGCACGTAGATCTTTCGAAGAA
GAATTGAGTGTTGAAAAGTATGCAAAAGCTCAACCACCTGAAAAAACCAATTCTTCTGGAGATTTTGACGAAGTTGGAAT
GTCTTCCTGGTATGGCGCAAAGTTTCACGGTAAACCAACGGCAAGCGGAGAAAAATTTGATAAAACAAAACTAACTGCTG
CACATCCAACACTTCCTTTAGGTTCCATCATTAGAGTTCAAAATTTAGAAAACCAAAAAGAAGTTATAGTTCGTGTCAAC
GATAGAGGACCTTTTGTAAAGGATAGAATCATTGATCTTTCTGAAAAAGCTGCAGATACTTTAGATTTTAAAGATGTAGG
TATTGCTAAAGTAGGTATTAAAGTAGTAAAACGTGGAGGAGCTGCAAACGAAGAATCCGAAGATCTCGAAAATTCTGACG
ATGAAGAAGCTCTTTTAGAAGATGGAAAACCTGAAAAACTAAATCCTCAAAAATCGGATTATCAAAACAAACCGATTGCC
GGTGGAAAGTATATCAAAGGTGCTCCTAAAGGATATACGGTTCAAGTAGGTGTTTTTCGGGAACAATCTAGAGCTGAATC
TTATAAATCTAATCTTGGACAAGAATACGGTGAAAAAACTTTCCTATTTACAAGAGATGGTTTATTTGTAATTCAGTTAG
GGGATTTCGCAAGCAGAACTGAGGCGGAATCGTTGAAATCGAAATTAAAAAACGATGGAATTGACTGTTTCATTCCGAAA
AAATAA

Upstream 100 bases:

>100_bases
TTCTAAGTTCAAAGCTTGGTTGAATCTTTTGCCTATATCCGCTCCTGTCATAGTATAACTATCGGAATCATTTCTATCCC
GGACGACTCAAAAAGTTGTA

Downstream 100 bases:

>100_bases
CCACCTTTAAATTTTAAAAAAATTGTTTCCTCGTTAGTAAACCCCGTAACTTTTTGCGGGGTTTCTCTTAGATTGTAAGA
GTTTATATTTTAAAGTTCTT

Product: putative lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 321; Mature: 321

Protein sequence:

>321_residues
MVFSRSTDLFKGINRTEETMKQIAILTALIIFTSCASVESKRSVSASGDPSEIFFEKEIIPMDSNSNFVSQKPARRSFEE
ELSVEKYAKAQPPEKTNSSGDFDEVGMSSWYGAKFHGKPTASGEKFDKTKLTAAHPTLPLGSIIRVQNLENQKEVIVRVN
DRGPFVKDRIIDLSEKAADTLDFKDVGIAKVGIKVVKRGGAANEESEDLENSDDEEALLEDGKPEKLNPQKSDYQNKPIA
GGKYIKGAPKGYTVQVGVFREQSRAESYKSNLGQEYGEKTFLFTRDGLFVIQLGDFASRTEAESLKSKLKNDGIDCFIPK
K

Sequences:

>Translated_321_residues
MVFSRSTDLFKGINRTEETMKQIAILTALIIFTSCASVESKRSVSASGDPSEIFFEKEIIPMDSNSNFVSQKPARRSFEE
ELSVEKYAKAQPPEKTNSSGDFDEVGMSSWYGAKFHGKPTASGEKFDKTKLTAAHPTLPLGSIIRVQNLENQKEVIVRVN
DRGPFVKDRIIDLSEKAADTLDFKDVGIAKVGIKVVKRGGAANEESEDLENSDDEEALLEDGKPEKLNPQKSDYQNKPIA
GGKYIKGAPKGYTVQVGVFREQSRAESYKSNLGQEYGEKTFLFTRDGLFVIQLGDFASRTEAESLKSKLKNDGIDCFIPK
K
>Mature_321_residues
MVFSRSTDLFKGINRTEETMKQIAILTALIIFTSCASVESKRSVSASGDPSEIFFEKEIIPMDSNSNFVSQKPARRSFEE
ELSVEKYAKAQPPEKTNSSGDFDEVGMSSWYGAKFHGKPTASGEKFDKTKLTAAHPTLPLGSIIRVQNLENQKEVIVRVN
DRGPFVKDRIIDLSEKAADTLDFKDVGIAKVGIKVVKRGGAANEESEDLENSDDEEALLEDGKPEKLNPQKSDYQNKPIA
GGKYIKGAPKGYTVQVGVFREQSRAESYKSNLGQEYGEKTFLFTRDGLFVIQLGDFASRTEAESLKSKLKNDGIDCFIPK
K

Specific function: Unknown

COG id: COG0797

COG function: function code M; Lipoproteins

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rlpA family [H]

Homologues:

Organism=Escherichia coli, GI1786852, Length=84, Percent_Identity=50, Blast_Score=95, Evalue=5e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009009
- InterPro:   IPR012997
- InterPro:   IPR007730 [H]

Pfam domain/function: PF03330 DPBB_1; PF05036 SPOR [H]

EC number: NA

Molecular weight: Translated: 35560; Mature: 35560

Theoretical pI: Translated: 5.63; Mature: 5.63

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00584 PFKB_KINASES_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVFSRSTDLFKGINRTEETMKQIAILTALIIFTSCASVESKRSVSASGDPSEIFFEKEII
CCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHEEEECEEE
PMDSNSNFVSQKPARRSFEEELSVEKYAKAQPPEKTNSSGDFDEVGMSSWYGAKFHGKPT
ECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCCEECCCCC
ASGEKFDKTKLTAAHPTLPLGSIIRVQNLENQKEVIVRVNDRGPFVKDRIIDLSEKAADT
CCCCCCCCCEEEECCCCCCCCCCCEECCCCCCEEEEEEECCCCCCHHHHHHCCHHHHHCC
LDFKDVGIAKVGIKVVKRGGAANEESEDLENSDDEEALLEDGKPEKLNPQKSDYQNKPIA
CCCCCCCHHHHHHHHHHCCCCCCCCHHHCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCC
GGKYIKGAPKGYTVQVGVFREQSRAESYKSNLGQEYGEKTFLFTRDGLFVIQLGDFASRT
CCCEECCCCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCEEEEEECCEEEEEECCCCCHH
EAESLKSKLKNDGIDCFIPKK
HHHHHHHHHHHCCCCEEECCC
>Mature Secondary Structure
MVFSRSTDLFKGINRTEETMKQIAILTALIIFTSCASVESKRSVSASGDPSEIFFEKEII
CCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHEEEECEEE
PMDSNSNFVSQKPARRSFEEELSVEKYAKAQPPEKTNSSGDFDEVGMSSWYGAKFHGKPT
ECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCCEECCCCC
ASGEKFDKTKLTAAHPTLPLGSIIRVQNLENQKEVIVRVNDRGPFVKDRIIDLSEKAADT
CCCCCCCCCEEEECCCCCCCCCCCEECCCCCCEEEEEEECCCCCCHHHHHHCCHHHHHCC
LDFKDVGIAKVGIKVVKRGGAANEESEDLENSDDEEALLEDGKPEKLNPQKSDYQNKPIA
CCCCCCCHHHHHHHHHHCCCCCCCCHHHCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCC
GGKYIKGAPKGYTVQVGVFREQSRAESYKSNLGQEYGEKTFLFTRDGLFVIQLGDFASRT
CCCEECCCCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCEEEEEECCEEEEEECCCCCHH
EAESLKSKLKNDGIDCFIPKK
HHHHHHHHHHHCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9252185 [H]