Definition Yersinia pestis biovar Microtus str. 91001 chromosome, complete genome.
Accession NC_005810
Length 4,595,065

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The map label for this gene is fimD1

Identifier: 45440313

GI number:

Start: 483667

End: 486045

Strand: Direct

Name: fimD1

Synonym: YP_0459

Alternate gene names: NA

Gene position: NA

Preceding gene: 45440312

Following gene: 45440314

Centisome position: NA

GC content: NA

Gene sequence:

>2379_bases
GTGGTCGCCCGTTGTATTAATCTCCAGTGTATCGCATTCTTATTCTCTTTTTTTCCTACGCTGGCTTTCCCTGTCACAGA
AGAGGGTGAGGTGGTTTTTGACATAGAAACGCTGGAGAGATTAGGTTATTCAGCTGAATTGGCAAAATTCTTCAGCGGTC
AGGATAGATTTCTACCCGGCCAACATGATGTCACTATCATTATTAATGCCAGCAAGACCTACCGTATTGCAGCGACCTTC
GATAGCGAAGGGAAACTGTGTATGGATAAAGCATTACTGATGGCCTTGAAATTACGAAATACAGAGAGTGACGGCAGTTG
TGAGAATATGGAAGCCCGGTGGCCGGGTATGGTTGTTAAACTCTTTCCCGGCCAGTTCCGGGTGGAAATAACATTGCCGC
AAGAGGCGTTTGATCCCGAAATGGAAGGAAGTGAGTATCAGCAAGGAGGGCATGCACTATTGCTTAATTACAATATCTTT
GGCCAACGGGTCGAAAGTAACAATAGCCGCTTTAATCTTGTTCAGGGGCAATTTGAACCGGGGATTAATTTTAAAAATTG
GGTACTGATAAACCGAGGTTCCTACAGTTATAATCAAGGAGTGAGCCAATACTATAATCAGGAAACCTCTGCTTTACGCG
CGGTTGAATCATTGAAATCCGTGGTTCAACTGGGTGAATTTGGTTTAGTGGGTAACACCTTTTCTGGTTTACCCGTAACC
GGCATTCAGTTGTATTCCGATAACGCACAACGGGATGATACACAATTGATCGTACCCATCGAGGGGATTGCCAATACCAA
TGCCACCATTGAAATCCGTCAGCGTGGGCGGGTTATTTATCGTACCATAGTGGCACCAGGTCCTTTTTCGTTATCCAATA
TCAGTAACTTCTCAAGTGGTGTTAACACCGATGTCAGTATTATCGAAGAGGATGGCACTCAACAGAATTTTACGGTGACG
AGCGCCCTTGATATTAACGCTGAACAACAGGCATCCATCTACCAACTGGCCGTGGGCCGTTACCGGGACATGTTTACCGG
TGAGGACAGGCCGTCACCGCTGCTGCTTTCCGGAGAAATGTCATTCAATCCGGCGGCTACCTTTTATATGACGTCGGCTG
GGTTACTGTCCTCTGGCTATCAAAATATCCGTGTGCAAAATCTTTACAGTGGATGGGATCAGGCCTGGTTTTCAGCGGCA
GCAAGTTATGCTAATACCAAAGATGCAGGACAGGGATACCAATTTAGCGTTCAGAATCAGATGACGATTAACGGTAATTT
TGGTGTTTCATGGTCCTCGGTTTATGGCTCGGCCAATTACTGGTTACCGGATGATGCCCTAAGCAGTAGCAATAATCTGA
ATGACCTGATGTTTGGAAAATTAAAAAATGCAACGTCGGTAGCCGTGAGCTGGGTGCACCCACGTTGGGGGGCATTCTCC
TATGCTTTATCAAATAATATGTATTATCAGGCTTCTGGTCGTACTTACCATATTTTCTCAATTAGCGAACAATTTGGCCG
GGCGACTACCATCTTGAGTTCTCAATTAAGTTCGCAAGGGCAAAATTCGCTCTATGTTGGTATCAATATGCCATTGGGTA
ATGGGACGTTAAGTGGCCGGGTGCAACGTAACAATGGCAATGTGGCACTTGGTAGTACTTATCAAGGGCGATGGGGTGAC
AACAAAGATTATTCGGTAGGGATCAGCGGTGACAATAGGCAACGGCGTATCAATGGTTCGATGAATATAAGGACGGCCTA
TTCACAATTAACCGGTGGGGTTTCTCAAGCGACAAACAATAGCCGGTCTGCATATCTGTCATCGCGTGGTTCAGTGGCTT
ACGTGAATAACACCTTTGCCACATCGTCGTCATCGGTTGGCGATACTTTTGCGGTGGTGAACATACCCAACCAACCCGGT
TTGCGCGTTTCATCGCCGAGCAGCGGTATTGCGATTACGGATTATGCTGGGATAGCCTTGCTGCCATTAGTGAGGCCTTA
CACCGCTTCGAAAGTACAAATAAGCACGCAAACATTGCCGCTGAATATTCGGCTTAATAACACCAGTGCCGATTTGCTGA
TGACTCGAGGCTCGGTAGCAACCCATCATTTTGAGACAACAGAAACCCGCCAATTGCTGCTAACCATCCGTGGTAGTGAT
GGTGAAATGCTGCCGATTGGTGCCAATGTATTGGATGAAAAAGGTAACTTTCTGGGGACGATTATCGGTGACGGAAACTT
TATGCTGGAAAATAAGGCGATTGGCGTGACATTACGTGTTAAGGCAAATAACCGCGATGAATGTCGCGTTAACTACCGTG
AACCTGAAAAATTTGACCCCGATGTATTGTATGAAGTTGCCGATGCGGTCTGTCAGTAA

Upstream 100 bases:

>100_bases
ATATACCATTGTTTTATTTAACTCTAGGGTGATATTCGATTTTTCAATAATCAATTCACCTATTAGTTTTTATTAATAAT
TAATTTTTCAGGGAATTTTC

Downstream 100 bases:

>100_bases
GTTTTACATTATAAAAGCAGCAATGACAAAAACAGACCAAATGTGAAGACTTTTTGAATATAGGATCTCTTATGCAAAAT
TTCCCCACTCACCATCGTGA

Product: putative outer membrane fimbrial usher protein

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>792_residues
MVARCINLQCIAFLFSFFPTLAFPVTEEGEVVFDIETLERLGYSAELAKFFSGQDRFLPGQHDVTIIINASKTYRIAATF
DSEGKLCMDKALLMALKLRNTESDGSCENMEARWPGMVVKLFPGQFRVEITLPQEAFDPEMEGSEYQQGGHALLLNYNIF
GQRVESNNSRFNLVQGQFEPGINFKNWVLINRGSYSYNQGVSQYYNQETSALRAVESLKSVVQLGEFGLVGNTFSGLPVT
GIQLYSDNAQRDDTQLIVPIEGIANTNATIEIRQRGRVIYRTIVAPGPFSLSNISNFSSGVNTDVSIIEEDGTQQNFTVT
SALDINAEQQASIYQLAVGRYRDMFTGEDRPSPLLLSGEMSFNPAATFYMTSAGLLSSGYQNIRVQNLYSGWDQAWFSAA
ASYANTKDAGQGYQFSVQNQMTINGNFGVSWSSVYGSANYWLPDDALSSSNNLNDLMFGKLKNATSVAVSWVHPRWGAFS
YALSNNMYYQASGRTYHIFSISEQFGRATTILSSQLSSQGQNSLYVGINMPLGNGTLSGRVQRNNGNVALGSTYQGRWGD
NKDYSVGISGDNRQRRINGSMNIRTAYSQLTGGVSQATNNSRSAYLSSRGSVAYVNNTFATSSSSVGDTFAVVNIPNQPG
LRVSSPSSGIAITDYAGIALLPLVRPYTASKVQISTQTLPLNIRLNNTSADLLMTRGSVATHHFETTETRQLLLTIRGSD
GEMLPIGANVLDEKGNFLGTIIGDGNFMLENKAIGVTLRVKANNRDECRVNYREPEKFDPDVLYEVADAVCQ

Sequences:
NA

Specific function: NA

COG id: COG3188

COG function: function code NU; P pilus assembly protein, porin PapC

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA