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The map label for this gene is 45358773

Identifier: 45358773

GI number: 45358773

Start: 1197303

End: 1197992

Strand: Direct

Name: 45358773

Synonym: MMP1210

Alternate gene names: NA

Gene position: 1197303-1197992 (Clockwise)

Preceding gene: 45358772

Following gene: 45358774

Centisome position: 72.08

GC content: 37.83

Gene sequence:

>690_bases
ATGGAGAAAATAGCGATACATATCATGGGAGAAATTGTATTGTCCGAAGATATCGGTAAAGCCATGAAAAAATGGAGAGA
AATGTTTGGCATACCGCAGATAGAAACTGCAAGGTACCTAGATGTCTCCCCATCCGTGATCAGTGATTACGAAGTTGGCA
GAAGAAAAAATCCTGGAGTAAATATCGTCAAAAAATATGTATATGCACTCTTAGAAATTGACAAAGAAAGAGGTGGACAT
ACAATAAAAGCATTGAGCAAGGTGTTGAACCCTACCTCGATGAAGGCGATTTTACAGATTAAAGAATACCAAAACCCAAT
TGGAGTCAAAGAATTACTTTCCACCATCGAAGGAAAGGTAATCTGTGGCGAAAACAATCTAAGTAACCAGCTATTTGGCC
ATACTGTTGTAGACAGTGTTAAAGCTATTTTAGAAATGAATGGTCAAGATTTTTTAAATCTATACGGTTGGACAACCGAA
AGGGCATTGATTTTTACCGAAGTTTCAGGTGGACGAAGTCCTATGGTTGCAATTCGTGTAAGCAACATCAAACCAAGAGT
CGTGATCTTTAACGGAGTTTCCGAACTTGACAAGCTCGCGGTTAAACTTGCTGAACTTGAGGGAATATCTCTTATAGTAA
CCGAACTAAGTACCGATGAGCTTTTAAAACGATTAAAAGAAATGAAATAA

Upstream 100 bases:

>100_bases
TGATTTTTGGATTTGCATTTTTGACAACTTCGACATATATCGAATGATATTTTATTTTAAATCGAAATATTTATATAAGA
ATTAGCCCACATATACTGCC

Downstream 100 bases:

>100_bases
TTTTTTTTGTTTATATTGTTATGAATTTAACAATTGTTCATTAACAAAAAAATGGTGAGCAAATGAAAGAAGTAGGTATT
GTAGGATATGGAAGTGACCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 229; Mature: 229

Protein sequence:

>229_residues
MEKIAIHIMGEIVLSEDIGKAMKKWREMFGIPQIETARYLDVSPSVISDYEVGRRKNPGVNIVKKYVYALLEIDKERGGH
TIKALSKVLNPTSMKAILQIKEYQNPIGVKELLSTIEGKVICGENNLSNQLFGHTVVDSVKAILEMNGQDFLNLYGWTTE
RALIFTEVSGGRSPMVAIRVSNIKPRVVIFNGVSELDKLAVKLAELEGISLIVTELSTDELLKRLKEMK

Sequences:

>Translated_229_residues
MEKIAIHIMGEIVLSEDIGKAMKKWREMFGIPQIETARYLDVSPSVISDYEVGRRKNPGVNIVKKYVYALLEIDKERGGH
TIKALSKVLNPTSMKAILQIKEYQNPIGVKELLSTIEGKVICGENNLSNQLFGHTVVDSVKAILEMNGQDFLNLYGWTTE
RALIFTEVSGGRSPMVAIRVSNIKPRVVIFNGVSELDKLAVKLAELEGISLIVTELSTDELLKRLKEMK
>Mature_229_residues
MEKIAIHIMGEIVLSEDIGKAMKKWREMFGIPQIETARYLDVSPSVISDYEVGRRKNPGVNIVKKYVYALLEIDKERGGH
TIKALSKVLNPTSMKAILQIKEYQNPIGVKELLSTIEGKVICGENNLSNQLFGHTVVDSVKAILEMNGQDFLNLYGWTTE
RALIFTEVSGGRSPMVAIRVSNIKPRVVIFNGVSELDKLAVKLAELEGISLIVTELSTDELLKRLKEMK

Specific function: Unknown

COG id: COG1709

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR017271
- InterPro:   IPR010982 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 25600; Mature: 25600

Theoretical pI: Translated: 8.91; Mature: 8.91

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKIAIHIMGEIVLSEDIGKAMKKWREMFGIPQIETARYLDVSPSVISDYEVGRRKNPGV
CCEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHCCCCCCCCH
NIVKKYVYALLEIDKERGGHTIKALSKVLNPTSMKAILQIKEYQNPIGVKELLSTIEGKV
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHCHHHHHHHHHHHHHCCCCCHHHHHHHHCCEE
ICGENNLSNQLFGHTVVDSVKAILEMNGQDFLNLYGWTTERALIFTEVSGGRSPMVAIRV
EECCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCEEEEEECCCCCCCEEEEEE
SNIKPRVVIFNGVSELDKLAVKLAELEGISLIVTELSTDELLKRLKEMK
CCCCCEEEEECCHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCC
>Mature Secondary Structure
MEKIAIHIMGEIVLSEDIGKAMKKWREMFGIPQIETARYLDVSPSVISDYEVGRRKNPGV
CCEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHCCCCCCCCH
NIVKKYVYALLEIDKERGGHTIKALSKVLNPTSMKAILQIKEYQNPIGVKELLSTIEGKV
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHCHHHHHHHHHHHHHCCCCCHHHHHHHHCCEE
ICGENNLSNQLFGHTVVDSVKAILEMNGQDFLNLYGWTTERALIFTEVSGGRSPMVAIRV
EECCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCEEEEEECCCCCCCEEEEEE
SNIKPRVVIFNGVSELDKLAVKLAELEGISLIVTELSTDELLKRLKEMK
CCCCCEEEEECCHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]