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The map label for this gene is 45358641

Identifier: 45358641

GI number: 45358641

Start: 1068603

End: 1069547

Strand: Direct

Name: 45358641

Synonym: MMP1078

Alternate gene names: NA

Gene position: 1068603-1069547 (Clockwise)

Preceding gene: 45358637

Following gene: 45358642

Centisome position: 64.33

GC content: 21.69

Gene sequence:

>945_bases
ATGTTATCGGATTTAATTTTCAAAATTAAAGGGGAAAATAATAACAAAGAAATTTCAGATTTTTTAAATATTTTAGATTG
TATTTACAAAAACAAAGAACCTGAAATTGATGAATTTATCTTAAAAAATTTAGGAATTGAAAAACGTGAAAATGATCTTA
AAATTTACGGCAAAAATTACCCGTTATTTAAAATGCTTTATTATTTTAACGAAATTACTCTTTTTAATTCTGAAAAAGAA
TCGATTATATTTTTAAAAAATAACAATTTAAACCCTTCAAAAACGTACCTTAAACTTGATAATTTTGAAAAAGAAAGATT
AAAAGAATTAATTTTAAATTTTGCGGAAAATAAAGTTCCAAATATGTATAAAACCTTTGTAAAAGACTTAATTTTTGGAA
ACACGTATTATTTTTCAAAATATAATATGGAATTAAAAGAATATGTTTCAAACCTAAATTCAGTATATAAATTAAAAGAA
TACGATATAGTTAAAAATTGCATATTGAAAAAAGAGTTACCTCCAAAAAATCTAATTTTAAAATATAAAACGGATCTTTC
AAAATCGATTGATTTGTTCAATAAAAAATTAAATAACACGAGAATTAGAGAATTTTCAATAGATTTTGATGGAAAAAACT
TCGATTGCCAGTACATCTATTTTAAACAGTCTCTTTGGGATAAAATTAAGGGATGGTTTTTTGGCGAAATTAATGGAATT
TACTACCCTGCAATTGTAAATATTTCATATAATAATTCAAAAATCGATTATTTGAAACCATTTTTTATTTTAAATGATAA
TGAAGACAAAATAAATGTTGTTGCAAAAGTTCCAAAACTTTTATATTTAAAATATGGCCTAACATTAAACTACATTAAAT
TAAATGGAAAACATACGTACTTTGGAAAATGGAACATTAGGAATTTTAAAAAAATTTTGTGGTAA

Upstream 100 bases:

>100_bases
TTTCAAGATTTCACCAAGCACAAATTAACGCCTAAACTAATACTTTATATCCTTTTAATTAATCATACATATAAAGGATT
TGATTTGTAAGGGGGTTTTC

Downstream 100 bases:

>100_bases
TTTATGAGTGAAAAACCGCTAATTTCAGTTTTAATGCCAAATTATAACTCTGAAAAATATTTAAATGAAGCGATTGAGTC
TATTTTAAATCAAACGTATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 314; Mature: 314

Protein sequence:

>314_residues
MLSDLIFKIKGENNNKEISDFLNILDCIYKNKEPEIDEFILKNLGIEKRENDLKIYGKNYPLFKMLYYFNEITLFNSEKE
SIIFLKNNNLNPSKTYLKLDNFEKERLKELILNFAENKVPNMYKTFVKDLIFGNTYYFSKYNMELKEYVSNLNSVYKLKE
YDIVKNCILKKELPPKNLILKYKTDLSKSIDLFNKKLNNTRIREFSIDFDGKNFDCQYIYFKQSLWDKIKGWFFGEINGI
YYPAIVNISYNNSKIDYLKPFFILNDNEDKINVVAKVPKLLYLKYGLTLNYIKLNGKHTYFGKWNIRNFKKILW

Sequences:

>Translated_314_residues
MLSDLIFKIKGENNNKEISDFLNILDCIYKNKEPEIDEFILKNLGIEKRENDLKIYGKNYPLFKMLYYFNEITLFNSEKE
SIIFLKNNNLNPSKTYLKLDNFEKERLKELILNFAENKVPNMYKTFVKDLIFGNTYYFSKYNMELKEYVSNLNSVYKLKE
YDIVKNCILKKELPPKNLILKYKTDLSKSIDLFNKKLNNTRIREFSIDFDGKNFDCQYIYFKQSLWDKIKGWFFGEINGI
YYPAIVNISYNNSKIDYLKPFFILNDNEDKINVVAKVPKLLYLKYGLTLNYIKLNGKHTYFGKWNIRNFKKILW
>Mature_314_residues
MLSDLIFKIKGENNNKEISDFLNILDCIYKNKEPEIDEFILKNLGIEKRENDLKIYGKNYPLFKMLYYFNEITLFNSEKE
SIIFLKNNNLNPSKTYLKLDNFEKERLKELILNFAENKVPNMYKTFVKDLIFGNTYYFSKYNMELKEYVSNLNSVYKLKE
YDIVKNCILKKELPPKNLILKYKTDLSKSIDLFNKKLNNTRIREFSIDFDGKNFDCQYIYFKQSLWDKIKGWFFGEINGI
YYPAIVNISYNNSKIDYLKPFFILNDNEDKINVVAKVPKLLYLKYGLTLNYIKLNGKHTYFGKWNIRNFKKILW

Specific function: Unknown

COG id: COG0608

COG function: function code L; Single-stranded DNA-specific exonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.jannaschii MJ0977 C-terminal region [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37771; Mature: 37771

Theoretical pI: Translated: 9.70; Mature: 9.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSDLIFKIKGENNNKEISDFLNILDCIYKNKEPEIDEFILKNLGIEKRENDLKIYGKNY
CCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCEEEEECCC
PLFKMLYYFNEITLFNSEKESIIFLKNNNLNPSKTYLKLDNFEKERLKELILNFAENKVP
CHHHHHHHHHEEEEEECCCCEEEEEECCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCC
NMYKTFVKDLIFGNTYYFSKYNMELKEYVSNLNSVYKLKEYDIVKNCILKKELPPKNLIL
HHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEE
KYKTDLSKSIDLFNKKLNNTRIREFSIDFDGKNFDCQYIYFKQSLWDKIKGWFFGEINGI
EEECCCHHHHHHHHHHCCCCEEEEEEEEECCCCCCEEEEEEHHHHHHHHCCEEEEEECCE
YYPAIVNISYNNSKIDYLKPFFILNDNEDKINVVAKVPKLLYLKYGLTLNYIKLNGKHTY
EEEEEEEEEECCCEEEEECEEEEEECCCCEEEEEECCCHHEEEEECCEEEEEEECCCEEE
FGKWNIRNFKKILW
EEECCHHHHHHHCC
>Mature Secondary Structure
MLSDLIFKIKGENNNKEISDFLNILDCIYKNKEPEIDEFILKNLGIEKRENDLKIYGKNY
CCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCEEEEECCC
PLFKMLYYFNEITLFNSEKESIIFLKNNNLNPSKTYLKLDNFEKERLKELILNFAENKVP
CHHHHHHHHHEEEEEECCCCEEEEEECCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCC
NMYKTFVKDLIFGNTYYFSKYNMELKEYVSNLNSVYKLKEYDIVKNCILKKELPPKNLIL
HHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEE
KYKTDLSKSIDLFNKKLNNTRIREFSIDFDGKNFDCQYIYFKQSLWDKIKGWFFGEINGI
EEECCCHHHHHHHHHHCCCCEEEEEEEEECCCCCCEEEEEEHHHHHHHHCCEEEEEECCE
YYPAIVNISYNNSKIDYLKPFFILNDNEDKINVVAKVPKLLYLKYGLTLNYIKLNGKHTY
EEEEEEEEEECCCEEEEECEEEEEECCCCEEEEEECCCHHEEEEECCEEEEEEECCCEEE
FGKWNIRNFKKILW
EEECCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]